(Q41075166)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

title

A fully scalable online pre-processing algorithm for short oligonucleotide microarray atlases (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Alvis Brazma

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Leo Lahti

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Aurora Torrente

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

Johan Rung

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

author name string

Johan Rung

5

1 reference

26 September 2017

5 April 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

volume

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

page(s)

e110

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

28 February 2020

copyright license

start time

5 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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26 September 2017

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The sva package for removing batch effects and other unwanted variation in high-throughput experiments

26 September 2017

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Quantifying the white blood cell transcriptome as an accessible window to the multiorgan transcriptome

26 September 2017

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Empirical comparison of cross-platform normalization methods for gene expression data

26 September 2017

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Thawing Frozen Robust Multi-array Analysis (fRMA)

26 September 2017

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Removing batch effects in analysis of expression microarray data: an evaluation of six batch adjustment methods

26 September 2017

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ArrayExpress update--an archive of microarray and high-throughput sequencing-based functional genomics experiments

26 September 2017

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Advanced approaches to characterize the human intestinal microbiota by computational meta-analysis

26 September 2017

1 reference

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A global map of human gene expression

26 September 2017

1 reference

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affyPara-a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data

26 September 2017

1 reference

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Frozen robust multiarray analysis (fRMA).

26 September 2017

1 reference

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Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults

26 September 2017

1 reference

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Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues

26 September 2017

1 reference

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Probe selection and expression index computation of Affymetrix Exon Arrays

26 September 2017

1 reference

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Urban aerosols harbor diverse and dynamic bacterial populations

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3664815

A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3664815

A new summarization method for Affymetrix probe level data

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3664815

Integrating probe-level expression changes across generations of Affymetrix arrays

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3664815

Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data

26 September 2017

1 reference

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NCBI GEO: mining millions of expression profiles--database and tools

26 September 2017

1 reference

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A gene atlas of the mouse and human protein-encoding transcriptomes

26 September 2017

1 reference

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

26 September 2017

1 reference

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Summaries of Affymetrix GeneChip probe level data

26 September 2017

1 reference

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

26 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3664815

Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

26 September 2017

1 reference

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Expression monitoring by hybridization to high-density oligonucleotide arrays

26 September 2017

1 reference

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Large scale comparison of global gene expression patterns in human and mouse.

26 September 2017

1 reference

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Probabilistic analysis of probe reliability in differential gene expression studies with short oligonucleotide arrays

14 June 2018

1 reference

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A benchmark for Affymetrix GeneChip expression measures

19 August 2018

1 reference

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19 August 2018

Identifiers

DOI

10.1093/NAR/GKT229

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json

28 February 2020

PubMed publication ID

23563154

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23563154%20AND%20SRC:MED&resulttype=core&format=json