(Q41221306)

28 September 2017

Bioinformatic and mutational analysis of channelrhodopsin-2 protein cation-conducting pathway (English)

1 reference

28 September 2017

1 reference

1 reference

Anna Pia Plazzo

1

1 reference

28 September 2017

Nicola De Franceschi

2

1 reference

28 September 2017

Francesca Da Broi

3

1 reference

28 September 2017

Francesco Zonta

4

1 reference

28 September 2017

Maria Federica Sanasi

5

1 reference

28 September 2017

Francesco Filippini

6

1 reference

28 September 2017

Marco Mongillo

7

1 reference

28 September 2017

language of work or name

English

0 references

publication date

2 December 2011

1 reference

Journal of Biological Chemistry

28 September 2017

1 reference

28 September 2017

287

1 reference

28 September 2017

7

1 reference

28 September 2017

4818-4825

1 reference

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Light induced stimulation and delay of cardiac activity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Directional proton transfer in membrane proteins achieved through protonated protein-bound water molecules: a proton diode

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Ultrafast optogenetic control.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Structural guidance of the photocycle of channelrhodopsin-2 by an interhelical hydrogen bond.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Crystal structure of the light-driven chloride pump halorhodopsin from Natronomonas pharaonis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Channelrhodopsin-2 is a leaky proton pump.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Photocurrent attenuation by a single polar-to-nonpolar point mutation of channelrhodopsin-2.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Protein structure prediction on the Web: a case study using the Phyre server

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Bi-stable neural state switches

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Structural role of bacterioruberin in the trimeric structure of archaerhodopsin-2

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

In vivo light-induced activation of neural circuitry in transgenic mice expressing channelrhodopsin-2.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Channelrhodopsin-2-assisted circuit mapping of long-range callosal projections

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Multimodal fast optical interrogation of neural circuitry

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Channelrhodopsin-2 and optical control of excitable cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Fast noninvasive activation and inhibition of neural and network activity by vertebrate rhodopsin and green algae channelrhodopsin

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Millisecond-timescale, genetically targeted optical control of neural activity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Permeability and gating properties of human connexins 26 and 30 expressed in HeLa cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Channelrhodopsin-1: a light-gated proton channel in green algae.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

A rhodopsin is the functional photoreceptor for phototaxis in the unicellular eukaryote Chlamydomonas

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Alternative translocation of protons and halide ions by bacteriorhodopsin

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Multiple photocycles of channelrhodopsin

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Projection structure of channelrhodopsin-2 at 6 Å resolution by electron crystallography

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Glutamate residue 90 in the predicted transmembrane domain 2 is crucial for cation flux through channelrhodopsin 2.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Channelrhodopsin engineering and exploration of new optogenetic tools.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

The branched photocycle of the slow-cycling channelrhodopsin-2 mutant C128T.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

The DC gate in Channelrhodopsin-2: crucial hydrogen bonding interaction between C128 and D156.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Conformational changes of channelrhodopsin-2.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Glu 87 of channelrhodopsin-1 causes pH-dependent color tuning and fast photocurrent inactivation

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Crystal structures of archaerhodopsin-1 and -2: Common structural motif in archaeal light-driven proton pumps.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

Kinetic evaluation of photosensitivity in genetically engineered neurons expressing green algae light-gated channels.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

The complex extracellular domain regulates the deprotonation and reprotonation of the retinal Schiff base during the bacteriorhodopsin photocycle

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281600

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

19 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M111.326207

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M111.326207

Molecular dynamics with coupling to an external bath

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FJBC.M111.326207

Computer-aided drug design platform using PyMOL

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22139833

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Optogenetic control of heart muscle in vitro and in vivo

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22139833

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M111.326207

1 reference

28 September 2017

1 reference

28 September 2017

PubMed publication ID

22139833

1 reference