(Q41318289)

29 September 2017

The importance of peptide detectability for protein identification, quantification, and experiment design in MS/MS proteomics (English)

1 reference

29 September 2017

0 references

4

Predrag Radivojac

1 reference

29 September 2017

Yong Fuga Li

1

1 reference

29 September 2017

Randy J Arnold

series ordinal

2

1 reference

29 September 2017

Haixu Tang

series ordinal

3

1 reference

29 September 2017

10 November 2010

1 reference

Journal of Proteome Research

29 September 2017

1 reference

29 September 2017

9

1 reference

29 September 2017

12

1 reference

29 September 2017

6288-6297

1 reference

Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Calculating absolute and relative protein abundance from mass spectrometry-based protein expression data

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Prediction of peptides observable by mass spectrometry applied at the experimental set level

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Advancement in protein inference from shotgun proteomics using peptide detectability

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Scoring proteomes with proteotypic peptide probes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Definition and characterization of a "trypsinosome" from specific peptide characteristics by nano-HPLC-MS/MS and in silico analysis of complex protein mixtures.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Universality and flexibility in gene expression from bacteria to human

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Global analysis of protein expression in yeast

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

The human plasma proteome: history, character, and diagnostic prospects

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Probability-based protein identification by searching sequence databases using mass spectrometry data

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

A bayesian approach to protein inference problem in shotgun proteomics

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics

14 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Fast and accurate identification of semi-tryptic peptides in shotgun proteomics

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Computational prediction of proteotypic peptides for quantitative proteomics.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

A computational approach toward label-free protein quantification using predicted peptide detectability.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3006185

Computational prediction of proteotypic peptides

19 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21067214

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/PR1005586

1 reference

release_ame66nhbjjalnjyx2pai35jqua

29 September 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ame66nhbjjalnjyx2pai35jqua

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

29 September 2017

PubMed publication ID

21067214

1 reference