(Q41351139)

29 September 2017

The genome of epsilon15, a serotype-converting, Group E1 Salmonella enterica-specific bacteriophage (English)

1 reference

29 September 2017

0 references

1 reference

1

1 reference

29 September 2017

Irina V Kovalyova

2

1 reference

29 September 2017

Stephen J Billington

3

1 reference

29 September 2017

Aaron N Patrick

4

1 reference

29 September 2017

Brent D Butts

5

1 reference

29 September 2017

Jared A Guichard

6

1 reference

29 September 2017

Trevor J Pitcher

7

1 reference

29 September 2017

Carly C Guthrie

8

1 reference

29 September 2017

Anya D Sydlaske

9

1 reference

29 September 2017

Lisa M Barnhill

10

1 reference

29 September 2017

Kyle A Havens

11

1 reference

29 September 2017

Kenneth R Day

12

1 reference

29 September 2017

Darrel R Falk

13

1 reference

29 September 2017

Michael R McConnell

14

1 reference

29 September 2017

language of work or name

English

0 references

publication date

7 September 2007

1 reference

29 September 2017

1 reference

29 September 2017

369

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29 September 2017

2

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29 September 2017

234-244

1 reference

Structure of epsilon15 bacteriophage reveals genome organization and DNA packaging/injection apparatus

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Divergence and mosaicism among virulent soil phages of the Burkholderia cepacia complex

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Mauve: multiple alignment of conserved genomic sequence with rearrangements

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

A combined transmembrane topology and signal peptide prediction method

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Genomic and genetic analysis of Bordetella bacteriophages encoding reverse transcriptase-mediated tropism-switching cassettes

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Protein measurement with the Folin phenol reagent

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Phage integrases: biology and applications

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

A study of the conditions and mechanism of the diphenylamine reaction for the colorimetric estimation of deoxyribonucleic acid

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Conserved economics of transcription termination in eubacteria

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

An ancient player unmasked: T4 rI encodes a t-specific antiholin.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Sequence analysis and molecular characterization of the Lactococcus lactis temperate bacteriophage BK5-T.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Biochemical and genetic evidence for three transmembrane domains in the class I holin, lambda S.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Identification and characterization of a lysis module present in a large proportion of bacteriophages infecting Streptococcus thermophilus

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Tailed bacteriophages: the order caudovirales

1 October 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

1 October 2017

https://api.crossref.org/works/10.1016%2FJ.VIROL.2007.07.027

Iterated profile searches with PSI-BLAST--a tool for discovery in protein databases

7 January 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Analyzing genomes with cumulative skew diagrams

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

GeneMark.hmm: new solutions for gene finding

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Sequence analysis and molecular characterization of the temperate lactococcal bacteriophage r1t.

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Holins: form and function in bacteriophage lysis

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Studies on the mechanism of phage adsorption: Interaction between phage ϵ15 and its cellular receptor

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Basic local alignment search tool

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Searching for and predicting the activity of sites for DNA binding proteins: compilation and analysis of the binding sites for Escherichia coli integration host factor (IHF)

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Nucleotide sequence of the bacteriophage P22 genes required for DNA packaging

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Bacteriophage lysis: mechanism and regulation

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Terminal-sequence analysis of bacterial ribosomal RNA. Correlation between the 3'-terminal-polypyrimidine sequence of 16-S RNA and translational specificity of the ribosome

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Studies on the initial interactions of bacteriophage ϵ15 with its host cell, Salmonella anatum

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

The complete genomic sequence of lytic bacteriophage gh-1 infecting Pseudomonas putida--evidence for close relationship to the T7 group

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Strand-specific compositional asymmetries in double-stranded DNA viruses.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

The Receptor Site for a Bacterial Virus

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Mechanism of epsilon-15 conversion studies with bacteriphage mutants.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Mechanism of epsilon-15 conversion studies with a bacterial mutant.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Directional antisense and sense cDNA cloning using Epstein-Barr virus episomal expression vectors

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Restriction endonuclease and genetic mapping studies indicate that the vegetative genome of the temperate, salmonella-specific bacteriophage, Epsilon 15, is circularly-permuted

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

An improved hidden Markov model for transmembrane protein detection and topology prediction and its applications to complete genomes.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

The chromosome of Shigella flexneri bacteriophage Sf6: complete nucleotide sequence, genetic mosaicism, and DNA packaging.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Studies on the Chemical Basis of the Phage Conversion of O-Antigens in the E-Group Salmonellae*

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

The relationship of bacteriophage to antigenic changes in Group E salmonellas

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

ENZYMATIC AND KINETIC STUDIES ON THE MECHANISM OF O-ANTIGEN CONVERSION BY BACTERIOPHAGE EPSILON-15

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

ANALYSIS OF THE SEROLOGIC DETERMINANT GROUPS OF THE SALMONELLA E-GROUP O-ANTIGENS.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Conversion of somatic antigens in Salmonella by phage infection leading to lysis or lysogeny.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Two functional O-polysaccharide polymerase wzy (rfc) genes are present in the rfb gene cluster of Group E1 Salmonella enterica serovar Anatum.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Three-component-mediated serotype conversion in Pseudomonas aeruginosa by bacteriophage D3.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Isolation of a trypsin-sensitive inhibitor of O-antigen synthesis involved in lysogenic conversion by bacteriophage ε15

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

DNA asymmetry and the replicational mutational pressure

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2698709

Sequence of the genome of the temperate, serotype-converting, Pseudomonas aeruginosa bacteriophage D3

4 November 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2007.07.027

Chromosomal locations of Salmonella conversion phages: Mapping of prophages g341, ϵ15, and ϵ34 in Salmonella anatum

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2007.07.027

In vitro interaction between phage and receptor lipopolysaccharide: a novel glycosidase associated with Salmonella phage 15 .

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2007.07.027

Mutants of Salmonella phage e 15 with abnormal conversion properties

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.VIROL.2007.07.027

10.1016/J.VIROL.2007.07.027

7 January 2021

Identifiers

DOI

1 reference

29 September 2017

1 reference

29 September 2017

PubMed publication ID

17825342

1 reference