(Q41470212)

1 October 2017

Influence of oligomerization on the dynamics of G-protein coupled receptors as assessed by normal mode analysis (English)

1 reference

G protein-coupled receptor

1 October 2017

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author

Marta Filizola

series ordinal

2

1 reference

1 October 2017

Masha Y Niv

1

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language of work or name

English

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publication date

1 May 2008

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1 October 2017

1 reference

1 October 2017

71

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1 October 2017

2

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1 October 2017

575-586

1 reference

Modeling activated states of GPCRs: the rhodopsin template

1 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Dynamic models of G-protein coupled receptor dimers: indications of asymmetry in the rhodopsin dimer from molecular dynamics simulations in a POPC bilayer.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

NOMAD-Ref: visualization, deformation and refinement of macromolecular structures based on all-atom normal mode analysis

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Cooperative fluctuations point to the dimerization interface of p53 core domain

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

G-protein-coupled receptor heterodimers: pharmacology, function and relevance to drug discovery

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Symmetry, form, and shape: guiding principles for robustness in macromolecular machines.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Opsin is present as dimers in COS1 cells: identification of amino acids at the dimeric interface

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Can conformational change be described by only a few normal modes?

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Crosstalk in G protein-coupled receptors: changes at the transmembrane homodimer interface determine activation

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

The association of tetrameric acetylcholinesterase with ColQ tail: a block normal mode analysis

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

The structure and dynamics of GPCR oligomers: a new focus in models of cell-signaling mechanisms and drug design.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Coarse-grained normal mode analysis in structural biology

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Comparison of tRNA motions in the free and ribosomal bound structures

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Usefulness and limitations of normal mode analysis in modeling dynamics of biomolecular complexes

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Normal-modes-based prediction of protein conformational changes guided by distance constraints

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Organization of the G protein-coupled receptors rhodopsin and opsin in native membranes

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

G-protein-coupled receptor oligomerization and its potential for drug discovery

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Conformational change of proteins arising from normal mode calculations

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Identifying conformational changes with site-directed spin labeling

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Towards 3D structures of G protein-coupled receptors: a multidisciplinary approach

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Vibrational dynamics of transfer RNAs: comparison of the free and synthetase-bound forms

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Human pigmentation phenotype: a point mutation generates nonfunctional MSH receptor

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

VMD: visual molecular dynamics

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Interpreting correlated motions using normal mode analysis.

11 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Predisposition of the dark state of rhodopsin to functional changes in structure

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Maturation dynamics of bacteriophage HK97 capsid

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

A normal mode analysis of structural plasticity in the biomolecular motor F(1)-ATPase

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

The fourth transmembrane segment forms the interface of the dopamine D2 receptor homodimer.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

Large Amplitude Elastic Motions in Proteins from a Single-Parameter, Atomic Analysis

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3489929

A comparison of the dynamic behavior of monomeric and dimeric insulin shows structural rearrangements in the active monomer

2 December 2018

1 reference

12 December 2020

Conformational changes in rhodopsin. Movement of helix f detected by site-specific chemical labeling and fluorescence spectroscopy

1 reference

12 December 2020

Dynamic structure of subtilisin-eglin c complex studied by normal mode analysis

1 reference

12 December 2020

Rhodopsin dimers in native disc membranes

1 reference

12 December 2020

The requirement for mechanical coupling between head and S2 domains in smooth muscle myosin ATPase regulation and its implications for dimeric motor function

1 reference

12 December 2020

Identifiers

DOI

10.1002/PROT.21787

1 reference

1 October 2017

1 reference

PMC publication ID

3489929

1 October 2017

PubMed publication ID

17963239

1 reference

PMC publication ID

3489929