(Q41511289)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

title

Intrinsically disordered RGG/RG domains mediate degenerate specificity in RNA binding (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

author name string

Bagdeser A Ozdilek

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

Valery F Thompson

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

Nasiha S Ahmed

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

Connor I White

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

Jacob C Schwartz

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

publication date

1 July 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

volume

45

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

issue

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

page(s)

7984-7996

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 4.0 International

21 March 2020

copyright license

start time

27 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5570134/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

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10 June 2018

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10 June 2018

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Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses.

10 June 2018

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10 June 2018

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The Structure and Dynamics of Higher-Order Assemblies: Amyloids, Signalosomes, and Granules

10 June 2018

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The expanding universe of ribonucleoproteins: of novel RNA-binding proteins and unconventional interactions

10 June 2018

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Mechanistic Insights into Cofactor-Dependent Coupling of RNA Folding and mRNA Transcription/Translation by a Cobalamin Riboswitch

10 June 2018

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The new (dis)order in RNA regulation

10 June 2018

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Making Sense of Intrinsically Disordered Proteins

10 June 2018

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ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure.

10 June 2018

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The recruitment of chromatin modifiers by long noncoding RNAs: lessons from PRC2.

10 June 2018

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The LC Domain of hnRNPA2 Adopts Similar Conformations in Hydrogel Polymers, Liquid-like Droplets, and Nuclei

10 June 2018

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Detection of RNA-Protein Interactions in Living Cells with SHAPE.

10 June 2018

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Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II

10 June 2018

1 reference

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Functional Advantages of Conserved Intrinsic Disorder in RNA-Binding Proteins

10 June 2018

1 reference

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Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins

10 June 2018

1 reference

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Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization

10 June 2018

1 reference

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Crystal structure reveals specific recognition of a G-quadruplex RNA by a β-turn in the RGG motif of FMRP.

10 June 2018

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RNA transcription modulates phase transition-driven nuclear body assembly

10 June 2018

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Nucleic acid-binding specificity of human FUS protein

10 June 2018

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Position-specific binding of FUS to nascent RNA regulates mRNA length

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Toward a consensus on the binding specificity and promiscuity of PRC2 for RNA.

10 June 2018

1 reference

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Biochemical Properties and Biological Functions of FET Proteins

10 June 2018

1 reference

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Principles and properties of eukaryotic mRNPs

10 June 2018

1 reference

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The role of FUS gene variants in neurodegenerative diseases

10 June 2018

1 reference

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Fragile X mental retardation protein regulates translation by binding directly to the ribosome

10 June 2018

1 reference

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Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre

10 June 2018

1 reference

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State of play in amyotrophic lateral sclerosis genetics

10 June 2018

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Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo

10 June 2018

1 reference

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RNA seeds higher-order assembly of FUS protein

10 June 2018

1 reference

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Phosphorylation-regulated binding of RNA polymerase II to fibrous polymers of low-complexity domains

10 June 2018

1 reference

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Promiscuous RNA binding by Polycomb repressive complex 2.

10 June 2018

1 reference

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Altered ribostasis: RNA-protein granules in degenerative disorders

10 June 2018

1 reference

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A compendium of RNA-binding motifs for decoding gene regulation.

10 June 2018

1 reference

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Peptides modeled on the RGG domain of AUF1/hnRNP-D regulate 3' UTR-dependent gene expression

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Defining the RGG/RG motif

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Mutations in prion-like domains in hnRNPA2B1 and hnRNPA1 cause multisystem proteinopathy and ALS

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

FUS binds the CTD of RNA polymerase II and regulates its phosphorylation at Ser2.

10 June 2018

1 reference

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The RRM domain of human fused in sarcoma protein reveals a non-canonical nucleic acid binding site.

10 June 2018

1 reference

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Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Regulation of protein phosphatase 1 by intrinsically disordered proteins

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Position-dependent FUS-RNA interactions regulate alternative splicing events and transcriptions

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

RGG motif proteins: modulators of mRNA functional states

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Cell-free formation of RNA granules: bound RNAs identify features and components of cellular assemblies.

10 June 2018

1 reference

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Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels

10 June 2018

1 reference

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Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

TLS/FUS (translocated in liposarcoma/fused in sarcoma) regulates target gene transcription via single-stranded DNA response elements

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

TDP-43 and FUS RNA-binding proteins bind distinct sets of cytoplasmic messenger RNAs and differently regulate their post-transcriptional fate in motoneuron-like cells.

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Scd6 targets eIF4G to repress translation: RGG motif proteins as a class of eIF4G-binding proteins.

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

G-quadruplexes and metal ions

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

RNA targets of wild-type and mutant FET family proteins

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Structure-function studies of FMRP RGG peptide recognition of an RNA duplex-quadruplex junction

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Three arginine residues within the RGG box are crucial for ICP27 binding to herpes simplex virus 1 GC-rich sequences and for efficient viral RNA export

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Cracking the phosphatase code: docking interactions determine substrate specificity

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

The TET family of proteins: functions and roles in disease

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Determining structures of RNA aptamers and riboswitches by X-ray crystallography

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Catalytic mechanisms and specificities of glutathione peroxidases: variations of a basic scheme

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Reconciling binding mechanisms of intrinsically disordered proteins.

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Domain architectures and characterization of an RNA-binding protein, TLS

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

The role of structural disorder in the function of RNA and protein chaperones

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

G-quartet-dependent recognition between the FMRP RGG box and RNA.

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Messenger-RNA-binding proteins and the messages they carry

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Fragile X mental retardation protein targets G quartet mRNAs important for neuronal function

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Identification of an RNA binding specificity for the potential splicing factor TLS

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

SAF-Box, a conserved protein domain that specifically recognizes scaffold attachment region DNA.

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Crystal structure of the conserved core of HIV-1 Nef complexed with a Src family SH3 domain

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Conserved structures and diversity of functions of RNA-binding proteins

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

FMR1 protein: conserved RNP family domains and selective RNA binding

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

A single amino acid in the SH3 domain of Hck determines its high affinity and specificity in binding to HIV-1 Nef protein

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Classification and purification of proteins of heterogeneous nuclear ribonucleoprotein particles by RNA-binding specificities

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Quantitative analysis of protein far UV circular dichroism spectra by neural networks

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Shuttling of pre-mRNA binding proteins between nucleus and cytoplasm

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

G-Quadruplex DNA- and RNA-Specific-Binding Proteins Engineered from the RGG Domain of TLS/FUS.

10 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

RS and RGG repeats as primitive proteins at the transition between the RNA and RNP worlds

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Monitoring RNA-ligand interactions using isothermal titration calorimetry.

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Epstein-Barr virus nuclear antigen 1 is a DNA-binding protein with strong RNA-binding activity

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

Degenerate recognition of a dissimilar antigenic peptide by myelin basic protein-reactive T cells. Implications for thymic education and autoimmunity

19 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5570134

A census of human RNA-binding proteins

19 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKX460

21 January 2018

Identifiers

DOI

10.1093/NAR/GKX460

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28575444%20AND%20SRC:MED&resulttype=core&format=json

21 March 2020

PubMed publication ID

28575444

1 reference