Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q41526489)
Watch
English
A small RNA serving both the Hfq and CsrA regulons
scientific article published on May 2013
In more languages
default for all languages
No label defined
No description defined
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
title
A small RNA serving both the Hfq and CsrA regulons
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
author
Jörg Vogel
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
Erik Holmqvist
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
author name string
Erik Holmqvist
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
retrieved
2 October 2017
publication date
1 May 2013
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
published in
Genes & Development
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
volume
27
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
issue
10
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
page(s)
1073-1078
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
cites work
Dual function of the McaS small RNA in controlling biofilm formation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Massive functional mapping of a 5'-UTR by saturation mutagenesis, phenotypic sorting and deep sequencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
An RNA degradation machine sculpted by Ro autoantigen and noncoding RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Targeted decay of a regulatory small RNA by an adaptor protein for RNase E and counteraction by an anti-adaptor RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Multi-disciplinary methods to define RNA-protein interactions and regulatory networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Mutations in interaction surfaces differentially impact E. coli Hfq association with small RNAs and their mRNA targets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Post-transcriptional control of the Escherichia coli PhoQ-PhoP two-component system by multiple sRNAs involves a novel pairing region of GcvB
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Small RNA binding-site multiplicity involved in translational regulation of a polycistronic mRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
A complex network of small non-coding RNAs regulate motility in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
An atlas of Hfq-bound transcripts reveals 3' UTRs as a genomic reservoir of regulatory small RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Post-transcriptional regulation on a global scale: form and function of Csr/Rsm systems.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Noncanonical repression of translation initiation through small RNA recruitment of the RNA chaperone Hfq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Multiple factors dictate target selection by Hfq-binding small RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Targeting of csgD by the small regulatory RNA RprA links stationary phase, biofilm formation and cell envelope stress in Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
The Csr/Rsm system of Yersinia and related pathogens: a post-transcriptional strategy for managing virulence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
A small RNA that regulates motility and biofilm formation in response to changes in nutrient availability in Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Small regulatory RNAs control the multi-cellular adhesive lifestyle of Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
'Life-style' control networks in Escherichia coli: signaling by the second messenger c-di-GMP.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Regulation by small RNAs in bacteria: expanding frontiers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
RodZ regulates the post-transcriptional processing of the Shigella sonnei type III secretion system
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Hfq and its constellation of RNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Circuitry linking the Csr and stringent response global regulatory systems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
RNase E action at a distance: degradation of target mRNAs mediated by an Hfq-binding small RNA in bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
The biofilm matrix
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Positive regulation by small RNAs and the role of Hfq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Two antisense RNAs target the transcriptional regulator CsgD to inhibit curli synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Small RNA as global regulator of carbon catabolite repression in Pseudomonas aeruginosa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Complex regulatory network encompassing the Csr, c-di-GMP and motility systems of Salmonella Typhimurium
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Activation of gene expression by small RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Caught at its own game: regulatory small RNA inactivated by an inducible transcript mimicking its target
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Determination of the regulon and identification of novel mRNA targets of Pseudomonas aeruginosa RsmA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
A conserved small RNA promotes silencing of the outer membrane protein YbfM
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
The RNA binding protein CsrA controls cyclic di-GMP metabolism by directly regulating the expression of GGDEF proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Gac/Rsm signal transduction pathway of gamma-proteobacteria: from RNA recognition to regulation of social behaviour
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
CsrA inhibits translation initiation of Escherichia coli hfq by binding to a single site overlapping the Shine-Dalgarno sequence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Identification of a novel regulatory protein (CsrD) that targets the global regulatory RNAs CsrB and CsrC for degradation by RNase E.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Hfq-dependent alterations of the transcriptome profile and effects on quorum sensing in Pseudomonas aeruginosa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
CsrA and three redundant small RNAs regulate quorum sensing in Vibrio cholerae.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
The pgaABCD locus of Escherichia coli promotes the synthesis of a polysaccharide adhesin required for biofilm formation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Global analysis of small RNA and mRNA targets of Hfq
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Global regulation by CsrA in Salmonella typhimurium
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
A bioinformatics based approach to discover small RNA genes in the Escherichia coli genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Positive regulation of motility and flhDC expression by the RNA-binding protein CsrA of Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
Identification and molecular characterization of csrA, a pleiotropic gene from Escherichia coli that affects glycogen biosynthesis, gluconeogenesis, cell size, and surface properties
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
6 June 2018
CsrA activates flhDC expression by protecting flhDC mRNA from RNase E-mediated cleavage.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
19 August 2018
Hfq and Hfq-dependent small RNAs are major contributors to multicellular development in Salmonella enterica serovar Typhimurium
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
19 August 2018
Biofilms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
19 August 2018
CsrA post-transcriptionally represses pgaABCD, responsible for synthesis of a biofilm polysaccharide adhesin of Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3672642
retrieved
19 August 2018
Regulation of the Escherichia coli csgD promoter: interplay between five transcription factors
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/23699406
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/GAD.220178.113
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
PMC publication ID
3672642
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
PubMed publication ID
23699406
1 reference
stated in
Europe PubMed Central
PMC publication ID
3672642
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23699406%20AND%20SRC:MED&resulttype=core&format=json
retrieved
1 March 2020
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit