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How to deal with parameters for whole-cell modelling.
scientific article published on 2 August 2017
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26 March 2020
title
How to deal with parameters for whole-cell modelling
(English)
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Europe PubMed Central
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5582120
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26 March 2020
author
Michael Stumpf
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2
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5582120
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26 March 2020
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Ann C Babtie
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5582120
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26 March 2020
publication date
2 August 2017
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26 March 2020
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Journal of the Royal Society Interface
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26 March 2020
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14
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26 March 2020
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133
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26 March 2020
cites work
The feasibility of genome-scale biological network inference using Graphics Processing Units
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Data-driven reverse engineering of signaling pathways using ensembles of dynamic models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Parameter estimation in large-scale systems biology models: a parallel and self-adaptive cooperative strategy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Parallelization and High-Performance Computing Enables Automated Statistical Inference of Multi-scale Models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Biophysically Motivated Regulatory Network Inference: Progress and Prospects
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Estimating intrinsic and extrinsic noise from single-cell gene expression measurements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Structural Identifiability of Dynamic Systems Biology Models.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Multi-omics integration accurately predicts cellular state in unexplored conditions for Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Inferring extrinsic noise from single-cell gene expression data using approximate Bayesian computation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Toward Community Standards and Software for Whole-Cell Modeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Analytic derivation of bacterial growth laws from a simple model of intracellular chemical dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitro kcat measurements
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
SYSTEMS BIOLOGY. Systems biology (un)certainties.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Quantitative time-resolved analysis reveals intricate, differential regulation of standard- and immuno-proteasomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Efficient Characterization of Parametric Uncertainty of Complex (Bio)chemical Networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Perspective: Sloppiness and emergent theories in physics, biology, and beyond
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
The principles of whole-cell modeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
CSI: a nonparametric Bayesian approach to network inference from multiple perturbed time series gene expression data.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Summary of the DREAM8 Parameter Estimation Challenge: Toward Parameter Identification for Whole-Cell Models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Using Genome-scale Models to Predict Biological Capabilities
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Good practices for building dynamical models in systems biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Positional information and reaction-diffusion: two big ideas in developmental biology combine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Mechanistic links between cellular trade-offs, gene expression, and growth
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Quantitative and logic modelling of molecular and gene networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Topological sensitivity analysis for systems biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
An efficient and unbiased method for sensitivity analysis of stochastic reaction networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
WholeCellSimDB: a hybrid relational/HDF database for whole-cell model predictions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Causal network inference using biochemical kinetics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Emergence of robust growth laws from optimal regulation of ribosome synthesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
An integrative, multi-scale, genome-wide model reveals the phenotypic landscape of Escherichia coli
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Model selection in systems biology depends on experimental design
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Models in biology: 'accurate descriptions of our pathetic thinking'.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Quantifying absolute protein synthesis rates reveals principles underlying allocation of cellular resources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
The future of whole-cell modeling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Bacterial growth: global effects on gene expression, growth feedback and proteome partition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Comparison of approaches for parameter identifiability analysis of biological systems.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Perturbation biology: inferring signaling networks in cellular systems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Reverse engineering and identification in systems biology: strategies, perspectives and challenges
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Accelerated discovery via a whole-cell model
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Taming the complexity of large models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Towards a whole-cell modeling approach for synthetic biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Automatic generation of predictive dynamic models reveals nuclear phosphorylation as the key Msn2 control mechanism
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Multiscale computational models of complex biological systems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Model selection in systems and synthetic biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
A community-driven global reconstruction of human metabolism.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Maximizing the information content of experiments in systems biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
How to infer gene networks from expression profiles, revisited
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Which of our modeling predictions are robust?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
A whole-cell computational model predicts phenotype from genotype
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Wisdom of crowds for robust gene network inference
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Bridging experiments, models and simulations: an integrative approach to validation in computational cardiac electrophysiology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
A Bayesian approach to targeted experiment design.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Efficient characterization of high-dimensional parameter spaces for systems biology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Sensitivity, robustness, and identifiability in stochastic chemical kinetics models.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Parameter estimation using meta-heuristics in systems biology: a comprehensive review
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
What the papers say: text mining for genomics and systems biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Large-scale in silico modeling of metabolic interactions between cell types in the human brain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Evolution under fluctuating environments explains observed robustness in metabolic networks
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Shifts in growth strategies reflect tradeoffs in cellular economics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Genome-scale reconstruction of Escherichia coli's transcriptional and translational machinery: a knowledge base, its mathematical formulation, and its functional characterization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Systems biology: experimental design
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Universally sloppy parameter sensitivities in systems biology models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Ensemble modeling for analysis of cell signaling dynamics.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
The use of the multi-model ensemble in probabilistic climate projections
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Parameter estimation in biochemical pathways: a comparison of global optimization methods
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Two approaches for metabolic pathway analysis?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Intrinsic and extrinsic contributions to stochasticity in gene expression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
A synthetic oscillatory network of transcriptional regulators
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Stochastic mechanisms in gene expression
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Positional information and the spatial pattern of cellular differentiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Simple mathematical models with very complicated dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
6 June 2018
Bayesian uncertainty analysis for complex systems biology models: emulation, global parameter searches and evaluation of gene functions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Cause and cure of sloppiness in ordinary differential equation models.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Quantifying the multi-scale performance of network inference algorithms.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
High-dimensional Bayesian parameter estimation: case study for a model of JAK2/STAT5 signaling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Addressing parameter identifiability by model-based experimentation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Practical limits for reverse engineering of dynamical systems: a statistical analysis of sensitivity and parameter inferability in systems biology models.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
The ABC of reverse engineering biological signalling systems.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Stochastic modelling for quantitative description of heterogeneous biological systems.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Mapping global sensitivity of cellular network dynamics: sensitivity heat maps and a global summation law.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
Systems analysis at the molecular scale.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582120
retrieved
19 August 2018
The chemical basis of morphogenesis
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1098%2FRSIF.2017.0237
retrieved
21 January 2018
A meeting with Enrico Fermi
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1098%2FRSIF.2017.0237
retrieved
21 January 2018
Identifiers
DOI
10.1098/RSIF.2017.0237
1 reference
stated in
Europe PubMed Central
PMCID
5582120
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28768879%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 March 2020
PMCID
5582120
1 reference
stated in
Europe PubMed Central
PMCID
5582120
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28768879%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 March 2020
PubMed ID
28768879
1 reference
stated in
Europe PubMed Central
PMCID
5582120
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28768879%20AND%20SRC:MED&resulttype=core&format=json
retrieved
26 March 2020
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