(Q41751460)

8 October 2017

Functional architecture of T7 RNA polymerase transcription complexes (English)

1 reference

8 October 2017

Dhananjaya Nayak

1

1 reference

8 October 2017

Qing Guo

series ordinal

2

1 reference

8 October 2017

Rui Sousa

series ordinal

3

1 reference

8 October 2017

language of work or name

English

0 references

publication date

31 May 2007

1 reference

8 October 2017

11

1 reference

Journal of Molecular Biology

inferred from page(s)

published in

1 reference

8 October 2017

371

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8 October 2017

2

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8 October 2017

490-500

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Structural confirmation of a bent and open model for the initiation complex of T7 RNA polymerase

8 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Lambda integrase: armed for recombination

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Characterization and calculation of a cytochrome c-cytochrome b5 complex using NMR data

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

A structural basis for allosteric control of DNA recombination by lambda integrase.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Architecture of recombination intermediates visualized by in-gel FRET of lambda integrase-Holliday junction-arm DNA complexes

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Definitions and analysis of DNA Holliday junction geometry

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Discontinuous movement and conformational change during pausing and termination by T7 RNA polymerase

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

The specificity loop of T7 RNA polymerase interacts first with the promoter and then with the elongating transcript, suggesting a mechanism for promoter clearance

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Structure of a transcribing T7 RNA polymerase initiation complex

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Interaction of T7 RNA polymerase with DNA in an elongation complex arrested at a specific psoralen adduct site.

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Energetic coupling between DNA bending and base pair opening

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Multiple roles for the T7 promoter nontemplate strand during transcription initiation and polymerase release

6 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

The structural mechanism of translocation and helicase activity in T7 RNA polymerase

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Structural basis for substrate selection by t7 RNA polymerase.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Contribution of opening and bending dynamics to specific recognition of DNA damage

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

The +2 NTP binding drives open complex formation in T7 RNA polymerase

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Structural transitions mediating transcription initiation by T7 RNA polymerase

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

The intercalating beta-hairpin of T7 RNA polymerase plays a role in promoter DNA melting and in stabilizing the melted DNA for efficient RNA synthesis

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

The T7 RNA polymerase intercalating hairpin is important for promoter opening during initiation but not for RNA displacement or transcription bubble stability during elongation

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Synthesis of the protein cutting reagent iron (S)-1-(p-bromoacetamidobenzyl)ethylenediaminetetraacetate and conjugation to cysteine side chains

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1986751

Role of open complex instability in kinetic promoter selection by bacteriophage T7 RNA polymerase

18 August 2018

1 reference

12 December 2020

Weakening of the T7 promoter-polymerase interaction facilitates promoter release

1 reference

12 December 2020

Major conformational changes during T7RNAP transcription initiation coincide with, and are required for, promoter release

1 reference

12 December 2020

T7 RNA polymerase-induced bending of promoter DNA is coupled to DNA opening

1 reference

12 December 2020

Rapid binding of T7 RNA polymerase is followed by simultaneous bending and opening of the promoter DNA

1 reference

12 December 2020

T7 RNA polymerase elongation complex structure and movement

1 reference

12 December 2020

Characterization of T7 RNA polymerase transcription complexes assembled on nucleic acid scaffolds

1 reference

12 December 2020

10.1016/J.JMB.2007.05.070

Identifiers

DOI

1 reference

8 October 2017

1 reference

8 October 2017

PubMed publication ID

17580086

1 reference