(Q44796703)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15016373%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

title

Structural basis for substrate selection by t7 RNA polymerase (English)

1 reference

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25 December 2019

5

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25 December 2019

author name string

Dmitry Temiakov

1

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25 December 2019

Vsevolod Patlan

2

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25 December 2019

Michael Anikin

3

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25 December 2019

William T McAllister

4

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25 December 2019

Dmitry G Vassylyev

6

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25 December 2019

language of work or name

English

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publication date

1 February 2004

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25 December 2019

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25 December 2019

volume

116

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25 December 2019

page(s)

381-391

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25 December 2019

issue

3

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A single side chain prevents Escherichia coli DNA polymerase I (Klenow fragment) from incorporating ribonucleotides

25 December 2019

cites work

1 reference

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7 January 2021

Base miscoding and strand misalignment errors by mutator Klenow polymerases with amino acid substitutions at tyrosine 766 in the O helix of the fingers subdomain

1 reference

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7 January 2021

Roles of histidine 784 and tyrosine 639 in ribose discrimination by T7 RNA polymerase

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7 January 2021

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

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7 January 2021

Structure of a transcribing T7 RNA polymerase initiation complex

1 reference

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7 January 2021

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

1 reference

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7 January 2021

The mechanism of action of T7 DNA polymerase

1 reference

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7 January 2021

Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

1 reference

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7 January 2021

Swing-Gate Model of Nucleotide Entry into the RNA Polymerase Active Center

1 reference

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7 January 2021

Further additions to MolScript version 1.4, including reading and contouring of electron-density maps

1 reference

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7 January 2021

Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation.

1 reference

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7 January 2021

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

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7 January 2021

A model for the mechanism of polymerase translocation

1 reference

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7 January 2021

Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion

1 reference

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7 January 2021

T7 RNA polymerase elongation complex structure and movement

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7 January 2021

Misincorporation by wild-type and mutant T7 RNA polymerases: identification of interactions that reduce misincorporation rates by stabilizing the catalytically incompetent open conformation.

1 reference

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7 January 2021

Determinants of ribose specificity in RNA polymerization: effects of Mn2+ and deoxynucleoside monophosphate incorporation into transcripts

1 reference

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7 January 2021

Mechanism of ribose 2'-group discrimination by an RNA polymerase

1 reference

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7 January 2021

Structure of T7 RNA polymerase complexed to the transcriptional inhibitor T7 lysozyme

1 reference

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7 January 2021

Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations

1 reference

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7 January 2021

Choosing the right sugar: how polymerases select a nucleotide substrate

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7 January 2021

Swiss-PDB Viewer (Deep View).

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7 January 2021

Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal

1 reference

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7 January 2021

Mutants of T7 RNA polymerase that are able to synthesize both RNA and DNA

1 reference

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7 January 2021

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

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7 January 2021

Crystal structures of the Klenow fragment of Thermus aquaticus DNA polymerase I complexed with deoxyribonucleoside triphosphates

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900059-5

7 January 2021

Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.

1 reference

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7 January 2021

Major conformational changes occur during the transition from an initiation complex to an elongation complex by T7 RNA polymerase

1 reference

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7 January 2021

The phage RNA polymerases are related to DNA polymerases and reverse transcriptases

1 reference

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7 January 2021

Side chains that influence fidelity at the polymerase active site of Escherichia coli DNA polymerase I (Klenow fragment)

1 reference

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7 January 2021

Discrimination against purine-pyrimidine mispairs in the polymerase active site of DNA polymerase I: a structural explanation

1 reference

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7 January 2021

Bacterial RNA polymerases: the wholo story

1 reference

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7 January 2021

Asp537, Asp812 are essential and Lys631, His811 are catalytically significant in bacteriophage T7 RNA polymerase activity

1 reference

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7 January 2021

Processing of X-ray diffraction data collected in oscillation mode

1 reference

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7 January 2021

Prokaryotic DNA polymerase I: evolution, structure, and "base flipping" mechanism for nucleotide selection

1 reference

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7 January 2021

In vivo mutagenesis by Escherichia coli DNA polymerase I. Ile(709) in motif A functions in base selection.

1 reference

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7 January 2021

A mutant T7 RNA polymerase as a DNA polymerase.

1 reference

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7 January 2021

Crystal structure of bacteriophage T7 RNA polymerase at 3.3 A resolution

1 reference

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7 January 2021

A general two-metal-ion mechanism for catalytic RNA

1 reference

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7 January 2021

A unified polymerase mechanism for nonhomologous DNA and RNA polymerases

1 reference

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7 January 2021

Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution

1 reference

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7 January 2021

Characterization of T7 RNA polymerase transcription complexes assembled on nucleic acid scaffolds

1 reference

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7 January 2021

The specificity loop of T7 RNA polymerase interacts first with the promoter and then with the elongating transcript, suggesting a mechanism for promoter clearance

1 reference

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7 January 2021

Crystallization and preliminary crystallographic analysis of T7 RNA polymerase elongation complex.

1 reference

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7 January 2021

O-helix mutant T664P of Thermus aquaticus DNA polymerase I: altered catalytic properties for incorporation of incorrect nucleotides but not correct nucleotides

1 reference

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7 January 2021

Structural-functional analysis of bacteriophage T7 RNA polymerase

1 reference

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7 January 2021

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

1 reference

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7 January 2021

Pre-steady-state and steady-state kinetic studies on transcription initiation catalyzed by T7 RNA polymerase and its active-site mutants K631R and Y639F

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900059-5

7 January 2021

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900059-5

7 January 2021

The structural mechanism of translocation and helicase activity in T7 RNA polymerase.

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900059-5

7 January 2021

10.1016/S0092-8674(04)00059-5

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15016373%20AND%20SRC:MED&resulttype=core&format=json

25 December 2019

1 reference