(Q41783489)

English

The role of position a in determining the stability and oligomerization state of alpha-helical coiled coils: 20 amino acid stability coefficients in the hydrophobic core of proteins

scientific article published on November 1999

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scholarly article

1 reference

Europe PubMed Central

9 October 2017

The role of position a in determining the stability and oligomerization state of alpha-helical coiled coils: 20 amino acid stability coefficients in the hydrophobic core of proteins (English)

1 reference

Europe PubMed Central

9 October 2017

1 reference

based on heuristic

inferred from title

author name string

Wagschal K

1

1 reference

Europe PubMed Central

9 October 2017

Tripet B

2

1 reference

Europe PubMed Central

9 October 2017

Lavigne P

3

1 reference

Europe PubMed Central

9 October 2017

Mant C

4

1 reference

Europe PubMed Central

9 October 2017

Hodges RS

5

1 reference

Europe PubMed Central

9 October 2017

publication date

1 November 1999

1 reference

Europe PubMed Central

9 October 2017

Protein Science

1 reference

Europe PubMed Central

9 October 2017

8

1 reference

Europe PubMed Central

9 October 2017

2312-2329

1 reference

Europe PubMed Central

9 October 2017

11

1 reference

Europe PubMed Central

9 October 2017

Insights into the mechanism of heterodimerization from the 1H-NMR solution structure of the c-Myc-Max heterodimeric leucine zipper

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

The structure of the N-terminus of striated muscle alpha-tropomyosin in a chimeric peptide: nuclear magnetic resonance structure and circular dichroism studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Oligomerization properties of GCN4 leucine zipper e and g position mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

A single amino acid can switch the oligomerization state of the alpha-helical coiled-coil domain of cartilage matrix protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Boehringer Mannheim award lecture 1995. La conference Boehringer Mannheim 1995. De novo design of alpha-helical proteins: basic research to medical applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Predicting coiled-coil regions in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

MultiCoil: a program for predicting two- and three-stranded coiled coils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Atomic structure of the ectodomain from HIV-1 gp41

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Alpha-helical coiled-coil oligomerization domains in extracellular proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Demonstration of coiled-coil interactions within the kinesin neck region using synthetic peptides. Implications for motor activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Local versus nonlocal interactions in protein folding and stability--an experimentalist's point of view

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Alpha-helical protein assembly motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Buried polar residues and structural specificity in the GCN4 leucine zipper

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Crystal structures of a single coiled-coil peptide in two oligomeric states reveal the basis for structural polymorphism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Coiled coils: new structures and new functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

An engineered allosteric switch in leucine-zipper oligomerization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Native-like and structurally characterized designed alpha-helical bundles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

The stability of tropomyosin, a two-stranded coiled-coil protein, is primarily a function of the hydrophobicity of residues at the helix-helix interface.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Predicting oligomerization states of coiled coils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Interactions of coiled coils in transcription factors: where is the specificity?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Thermodynamic characterization of the structural stability of the coiled-coil region of the bZIP transcription factor GCN4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Guanidine hydrochloride stabilization of a partially unfolded intermediate during the reversible denaturation of protein disulfide isomerase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Packing and hydrophobicity effects on protein folding and stability: effects of beta-branched amino acids, valine and isoleucine, on the formation and stability of two-stranded alpha-helical coiled coils/leucine zippers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Crystal structure of a synthetic triple-stranded alpha-helical bundle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Structural and genetic analysis of protein stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Genetic analysis of the leucine heptad repeats of Lac repressor: evidence for a 4-helical bundle.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

An analysis of packing in the protein folding problem

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Structure, function and application of the coiled-coil protein folding motif

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Nuclear magnetic resonance characterization of the Jun leucine zipper domain: unusual properties of coiled-coil interfacial polar residues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Induced conformational states of amphipathic peptides in aqueous/lipid environments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Protein denaturation with guanidine hydrochloride or urea provides a different estimate of stability depending on the contributions of electrostatic interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Predicting coiled coils by use of pairwise residue correlations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Principles of protein folding--a perspective from simple exact models.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Determination of the helix and beta form of proteins in aqueous solution by circular dichroism.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Solvation energy in protein folding and binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Determination and analysis of urea and guanidine hydrochloride denaturation curves

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Evidence that the leucine zipper is a coiled coil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Alpha-helical coiled coils and bundles: how to design an alpha-helical protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Effect of preferred binding domains on peptide retention behavior in reversed-phase chromatography: amphipathic alpha-helices.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Predicting coiled coils from protein sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Surface electrostatic interactions contribute little of stability of barnase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Synthetic model proteins. Positional effects of interchain hydrophobic interactions on stability of two-stranded alpha-helical coiled-coils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Structure of the leucine zipper

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Effect of trifluoroethanol on protein secondary structure: an NMR and CD study using a synthetic actin peptide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

6 June 2018

Unzipping the secrets of coiled-coils.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

18 August 2018

Circular dichroic analysis of protein conformation: inclusion of the beta-turns.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

18 August 2018

SEQSEE: a comprehensive program suite for protein sequence analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

18 August 2018

Estimation of changes in side chain configurational entropy in binding and folding: general methods and application to helix formation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

18 August 2018

Protein destabilization by electrostatic repulsions in the two-stranded alpha-helical coiled-coil/leucine zipper

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

18 August 2018

The effect of conformation on the CD of interacting helices: a theoretical study of tropomyosin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144206

18 August 2018

Effect of chain length on the formation and stability of synthetic alpha-helical coiled coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synthetic model proteins: contribution of hydrophobic residues and disulfide bonds to protein stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tenascin-C hexabrachion assembly is a sequential two-step process initiated by coiled-coil alpha-helices

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synthesis of a model protein of defined secondary and quaternary structure. Effect of chain length on the stabilization and formation of two-stranded alpha-helical coiled-coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electrostatic interactions control the parallel and antiparallel orientation of alpha-helical chains in two-stranded alpha-helical coiled-coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of antiparallel and parallel two-stranded alpha-helical coiled-coils. Design, synthesis, and characterization

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relationship of sidechain hydrophobicity and alpha-helical propensity on the stability of the single-stranded amphipathic alpha-helix

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The relative positions of alanine residues in the hydrophobic core control the formation of two-stranded or four-stranded α-helical coiled-coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synthetic model for two-stranded alpha-helical coiled-coils. Design, synthesis, and characterization of an 86-residue analog of tropomyosin

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Leucine is the most stabilizing aliphatic amino acid in the d position of a dimeric leucine zipper coiled coil

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preferential Heterodimeric Parallel Coiled-coil Formation by Synthetic Max and c-Myc Leucine Zippers: A Description of Putative Electrostatic Interactions Responsible for the Specificity of Heterodimerization

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Use of a heterodimeric coiled-coil system for biosensor application and affinity purification

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

De novo design of a model peptide sequence to examine the effects of single amino acid substitutions in the hydrophobic core on both stability and oligomerization state of coiled-coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synthetic model proteins: the relative contribution of leucine residues at the nonequivalent positions of the 3-4 hydrophobic repeat to the stability of the two-stranded alpha-helical coiled-coil

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Orientation, positional, additivity, and oligomerization-state effects of interhelical ion pairs in alpha-helical coiled-coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The dimerization stability of the HLH-LZ transcription protein family is modulated by the leucine zippers: a CD and NMR study of TFEB and c-Myc

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proximity of sulfhydryl groups to the sites of interaction between components of the troponin complex from rabbit skeletal muscle

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A buried polar interaction imparts structural uniqueness in a designed heterodimeric coiled coil

1 reference

https://pubmed.ncbi.nlm.nih.gov/10595534

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1110/PS.8.11.2312

1 reference

Europe PubMed Central

9 October 2017

1 reference

Europe PubMed Central

9 October 2017

1 reference

Europe PubMed Central

9 October 2017

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