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Monte Carlo docking with ubiquitin
scientific article published on May 1995
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scholarly article
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Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
title
Monte Carlo docking with ubiquitin
(English)
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stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
author name string
Cummings MD
series ordinal
1
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stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
Hart TN
series ordinal
2
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stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
Read RJ
series ordinal
3
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Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
publication date
1 May 1995
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stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
published in
Protein Science
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stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
volume
4
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Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
page(s)
885-899
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Europe PubMed Central
PMCID
2143132
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12 October 2017
issue
5
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Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
cites work
Crystal structure of a ubiquitin-dependent degradation substrate: a three-disulfide form of lysozyme
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6 June 2018
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6 June 2018
A 26 S protease subunit that binds ubiquitin conjugates
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PubMed Central
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6 June 2018
Structure of tetraubiquitin shows how multiubiquitin chains can be formed
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PubMed Central
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6 June 2018
Solvent accessible surface area and excluded volume in proteins. Analytical equations for overlapping spheres and implications for the hydrophobic effect.
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PubMed Central
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6 June 2018
The yeast ubiquitin gene: head-to-tail repeats encoding a polyubiquitin precursor protein
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6 June 2018
Comparison of super-secondary structures in proteins
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6 June 2018
Solvation energy in protein folding and binding
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6 June 2018
Structure of ubiquitin refined at 1.8 A resolution
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PubMed Central
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6 June 2018
Specific recognition of calmodulin from Dictyostelium discoideum by the ATP, ubiquitin-dependent degradative pathway.
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6 June 2018
Gene synthesis, expression, structures, and functional activities of site-specific mutants of ubiquitin.
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6 June 2018
Voiding dysfunction in patients with human T-lymphotropic virus type-1-associated myelopathy (HAM).
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6 June 2018
A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein
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6 June 2018
Automated docking of substrates to proteins by simulated annealing
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6 June 2018
A 25-kilodalton ubiquitin carrier protein (E2) catalyzes multi-ubiquitin chain synthesis via lysine 48 of ubiquitin
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6 June 2018
A uniform isopeptide-linked multiubiquitin chain is sufficient to target substrate for degradation in ubiquitin-mediated proteolysis
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PubMed Central
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6 June 2018
Protein docking and complementarity
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6 June 2018
Protein-protein recognition analyzed by docking simulation.
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6 June 2018
Ubiquitination
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6 June 2018
The ubiquitin pathway for protein degradation
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6 June 2018
Natural substrates of the ubiquitin proteolytic pathway
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PubMed Central
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6 June 2018
A chimeric ubiquitin conjugating enzyme that combines the cell cycle properties of CDC34 (UBC3) and the DNA repair properties of RAD6 (UBC2): implications for the structure, function and evolution of the E2s
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6 June 2018
A multiple-start Monte Carlo docking method.
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PubMed Central
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6 June 2018
Docking by least-squares fitting of molecular surface patterns
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PubMed Central
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6 June 2018
A method for determining the positions of polar hydrogens added to a protein structure that maximizes protein hydrogen bonding
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PubMed Central
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6 June 2018
Ubiquitin and intracellular protein degradation
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PubMed Central
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6 June 2018
The ubiquitin-conjugation system
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PubMed Central
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6 June 2018
Prediction of the structure of a receptor-protein complex using a binary docking method
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143132
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6 June 2018
The ubiquitin system for protein degradation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143132
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6 June 2018
Structure of a diubiquitin conjugate and a model for interaction with ubiquitin conjugating enzyme (E2)
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PubMed Central
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6 June 2018
Three-dimensional structure of a ubiquitin-conjugating enzyme (E2)
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143132
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6 June 2018
The N-end rule
1 reference
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PubMed Central
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6 June 2018
Ubiquitin conjugation to cytochromes c. Structure of the yeast iso-1 conjugate and possible recognition determinants
1 reference
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PubMed Central
reference URL
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6 June 2018
The Protein Data Bank: a computer-based archival file for macromolecular structures
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PubMed Central
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6 June 2018
Ligand docking to proteins with discrete side-chain flexibility.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143132
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18 August 2018
Rigid-body docking with mutant constraints of influenza hemagglutinin with antibody HC19.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2143132
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18 August 2018
Surface, subunit interfaces and interior of oligomeric proteins
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PubMed
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https://pubmed.ncbi.nlm.nih.gov/7663344
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12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The structure of interfaces between subunits of dimeric and tetrameric proteins
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/7663344
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Occurrence of a polyubiquitin structure in ubiquitin-protein conjugates
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/7663344
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Structure and activities of a variant ubiquitin sequence from bakers' yeast
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/7663344
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1002/PRO.5560040508
1 reference
stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
PMCID
2143132
1 reference
stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
PubMed ID
7663344
1 reference
stated in
Europe PubMed Central
PMCID
2143132
retrieved
12 October 2017
ResearchGate publication ID
15536502
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