(Q41873300)

13 October 2017

HPC-CLUST: distributed hierarchical clustering for large sets of nucleotide sequences (English)

1 reference

13 October 2017

hierarchical clustering

1 reference

based on heuristic

inferred from title

author

João F Matias Rodrigues

series ordinal

1

1 reference

13 October 2017

2

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PMCID

3892691

13 October 2017

language of work or name

English

0 references

publication date

9 November 2013

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13 October 2017

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13 October 2017

30

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13 October 2017

287-288

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13 October 2017

2

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Creative Commons Attribution 3.0 Unported

13 October 2017

start time

2 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A large-scale benchmark study of existing algorithms for taxonomy-independent microbial community analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3892691

Search and clustering orders of magnitude faster than BLAST

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3892691

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3892691

ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3892691

Infernal 1.0: inference of RNA alignments

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3892691

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3892691

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3892691

Efficient algorithms for agglomerative hierarchical clustering methods

5 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTT657

10.1093/BIOINFORMATICS/BTT657

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/RodriguesM14

13 October 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

13 October 2017

1 reference

PMCID

3892691