(Q41940536)

14 October 2017

The evolution of isochore patterns in vertebrate genomes (English)

1 reference

14 October 2017

Maria Costantini

1

1 reference

14 October 2017

Rosalia Cammarano

series ordinal

2

1 reference

14 October 2017

Giorgio Bernardi

series ordinal

3

1 reference

14 October 2017

language of work or name

English

0 references

publication date

3 April 2009

1 reference

14 October 2017

1 reference

14 October 2017

10

1 reference

14 October 2017

146

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-146

14 October 2017

0 references

cites work

The early apoptotic DNA fragmentation targets a small number of specific open chromatin regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

The short-sequence designs of isochores from the human genome

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Assignment of isochores for all completely sequenced vertebrate genomes using a consensus

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Compositional properties and thermal adaptation of 18S rRNA in vertebrates

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Genome analysis of the platypus reveals unique signatures of evolution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Replication timing, chromosomal bands, and isochores

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Isochore patterns and gene distributions in fish genomes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Comparing segmentations by applying randomization techniques

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

The neoselectionist theory of genome evolution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Adaptation or biased gene conversion? Extending the null hypothesis of molecular evolution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Human chromosomal bands: nested structure, high-definition map and molecular basis

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

DNA methylation and body temperature in fishes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Paleontological evidence to date the tree of life

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

A new perspective on isochore evolution.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

A genomic code for nucleosome positioning

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

An isochore map of human chromosomes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

The platypus is in its place: nuclear genes and indels confirm the sister group relation of monotremes and Therians

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Evidence for endothermic ancestors of crocodiles at the stem of archosaur evolution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

IsoFinder: computational prediction of isochores in genome sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Representing GC variation along eukaryotic chromosomes

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

The fine-scale structure of recombination rate variation in the human genome

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

The evolution of isochores

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

The mosaic genome of warm-blooded vertebrates

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Evidence for higher rates of nucleotide substitution in rodents than in man

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Compositional patterns in vertebrate genomes: conservation and change in evolution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Compositional constraints and genome evolution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Higher rates of amino acid substitution in rodents than in humans

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

An analysis of eukaryotic genomes by density gradient centrifugation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Environmental genomics: a tale of two fishes.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

A compact view of isochores in the draft human genome sequence

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Segmentation of long genomic sequences into domains with homogeneous composition with BASIO software.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

CLEANUP: a fast computer program for removing redundancies from nucleotide sequence databases.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Patterns of Vertebrate Isochore Evolution Revealed by Comparison of Expressed Mammalian, Avian, and Crocodilian Genes

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2678159

Correlations between genomic GC levels and optimal growth temperatures in prokaryotes

2 December 2018

1 reference

12 December 2020

Directional fixation of mutations in vertebrate evolution

1 reference

12 December 2020

CpG islands: features and distribution in the genomes of vertebrates

1 reference

12 December 2020

Evolutionary changes in CpG and methylation levels in the genome of vertebrates

1 reference

12 December 2020

Isochore pattern and gene distribution in the chicken genome

1 reference

12 December 2020

Mapping DNase-I hypersensitive sites on human isochores

1 reference

12 December 2020

A novel method to calculate the G+C content of genomic DNA sequences

1 reference

12 December 2020

Compositional mapping of chicken chromosomes and identification of the gene-richest regions

1 reference

12 December 2020

Isochore conservation between MHC regions on human chromosome 6 and mouse chromosome 17

1 reference

12 December 2020

Localization of the gene-richest and the gene-poorest isochores in the interphase nuclei of mammals and birds

1 reference

12 December 2020

Body temperature and evolutionary genomics of vertebrates: a lesson from the genomes of Takifugu rubripes and Tetraodon nigroviridis

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-10-146

1 reference

Dimensions Publication ID

14 October 2017

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-10-146

1 reference

14 October 2017

PubMed publication ID

19344507

1 reference