(Q41960881)

14 October 2017

PDB_Hydro: incorporating dipolar solvents with variable density in the Poisson-Boltzmann treatment of macromolecule electrostatics (English)

1 reference

14 October 2017

1 reference

2

1 reference

14 October 2017

Patrice Koehl

3

0 references

Henri Orland

object named as

Henri Orland

series ordinal

4

0 references

author name string

Cyril Azuara

series ordinal

1

1 reference

14 October 2017

Marc Delarue

series ordinal

5

1 reference

14 October 2017

1 July 2006

1 reference

14 October 2017

Nucleic Acids Research

1 reference

14 October 2017

34

1 reference

14 October 2017

Web Server issue

1 reference

14 October 2017

W38-42

1 reference

PCE: web tools to compute protein continuum electrostatics

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Improving implicit solvent simulations: a Poisson-centric view

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Is the first hydration shell of lysozyme of higher density than bulk water?

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Improved recognition of native-like protein structures using a family of designed sequences

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Poisson-Boltzmann theory for membranes with mobile charged lipids and the pH-dependent interaction of a DNA molecule with a membrane

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Electrostatics of nanosystems: application to microtubules and the ribosome

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

What are the dielectric "constants" of proteins and how to validate electrostatic models?

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Application of a self-consistent mean field theory to predict protein side-chains conformation and estimate their conformational entropy

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

A global model of the protein-solvent interface

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Classical electrostatics in biology and chemistry

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Calculations of electrostatic interactions in biological systems and in solutions

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Improved methods for building protein models in electron density maps and the location of errors in these models

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Intramolecular dielectric screening in proteins.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Theoretical studies of enzymic reactions: dielectric, electrostatic and steric stabilization of the carbonium ion in the reaction of lysozyme

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Macroscopic electrostatic models for protonation states in proteins

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Protein hydration observed by X-ray diffraction. Solvation properties of penicillopepsin and neuraminidase crystal structures.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Calculations of electrostatic energies in proteins. The energetics of ionized groups in bovine pancreatic trypsin inhibitor

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1538897

Calculation of the electric potential in the active site cleft due to alpha-helix dipoles

3 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845031

12 December 2020

inferred from PubMed ID database lookup

Protein dynamics with off-lattice Monte Carlo moves

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845031

12 December 2020

inferred from PubMed ID database lookup

Improving macromolecular electrostatics calculations

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16845031

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKL072

1 reference

journals/nar/AzuaraLKOD06

14 October 2017

1 reference

DBLP Dataset 2021-01-02

release_wxniqxstxzetdkc2obrsx6p4ku

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/wxniqxstxzetdkc2obrsx6p4ku

24 November 2022

mapped directly with Wikidata item

1 reference

14 October 2017

PubMed publication ID

16845031

1 reference