(Q41973072)

14 October 2017

A deeper look into Comet--implementation and features (English)

1 reference

14 October 2017

1

Jimmy K Eng

1 reference

14 October 2017

6

Michael J MacCoss

1 reference

14 October 2017

Michael R Hoopmann

2

1 reference

14 October 2017

Tahmina A Jahan

series ordinal

3

1 reference

14 October 2017

Jarrett D Egertson

series ordinal

4

1 reference

14 October 2017

William S Noble

series ordinal

5

1 reference

14 October 2017

27 June 2015

1 reference

Journal of the American Society for Mass Spectrometry

14 October 2017

1 reference

14 October 2017

26

1 reference

14 October 2017

11

1 reference

14 October 2017

1865-1874

1 reference

Computing exact p-values for a cross-correlation shotgun proteomics score function

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

MASSyPup--an 'out of the box' solution for the analysis of mass spectrometry data

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Protein interactions, post-translational modifications and topologies in human cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Comet: an open-source MS/MS sequence database search tool

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Tempest: GPU-CPU computing for high-throughput database spectral matching

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Proteomic and phosphoproteomic comparison of human ES and iPS cells

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Examining troughs in the mass distribution of all theoretically possible tryptic peptides.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Faster SEQUEST searching for peptide identification from tandem mass spectra

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

ProHits: integrated software for mass spectrometry-based interaction proteomics

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

MacroSEQUEST: efficient candidate-centric searching and high-resolution correlation analysis for large-scale proteomics data sets

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Protein identification using Sorcerer 2 and SEQUEST.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Statistical calibration of the SEQUEST XCorr function

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

PatternLab for proteomics: a tool for differential shotgun proteomics

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Overview of tandem mass spectrometry (MS/MS) database search algorithms

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

The Transformation of Glutaminic Acid into l-Pyrrolidonecarboxylic Acid in Aqueous Solution

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

A uniform proteomics MS/MS analysis platform utilizing open XML file formats

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

PRIDE: the proteomics identifications database

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Statistical significance for genomewide studies

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

N-terminal acetyltransferases and sequence requirements for N-terminal acetylation of eukaryotic proteins

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

PeptideShaker enables reanalysis of MS-derived proteomics data sets.

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

A fast SEQUEST cross correlation algorithm

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Rapid and accurate peptide identification from tandem mass spectra

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4607604

Mass spectrometric protein identification using the global proteome machine.

18 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS13361-015-1179-X

10.1007/S13361-015-1179-X

21 January 2018

Identifiers

DOI

1 reference

Dimensions Publication ID

14 October 2017

1020128693

0 references

Fatcat ID

release_xe6iwxsorjhp5d7eju5fwaxjoa

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/xe6iwxsorjhp5d7eju5fwaxjoa

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

14 October 2017

PubMed publication ID

26115965

1 reference