(Q41991412)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

title

The trans-silencing capacity of invertedly repeated transgenes depends on their epigenetic state in tobacco (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

6

1 reference

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20 January 2020

Ales Kovarik

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Annick Bleys

2

1 reference

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20 January 2020

author name string

Miloslava Fojtová

1

1 reference

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20 January 2020

Jana Bedrichová

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Helena Van Houdt

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

Katerina Krízová

5

1 reference

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20 January 2020

publication date

2 May 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

published in

Nucleic Acids Research

1 reference

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20 January 2020

volume

34

1 reference

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20 January 2020

issue

8

1 reference

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20 January 2020

page(s)

2280-2293

1 reference

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describes a project that uses

20 January 2020

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC1456325/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Plants, pairing and phenotypes--two's company?

5 June 2018

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Epigenetic control of plant development: new layers of complexity

5 June 2018

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Transcription from an upstream promoter controls methylation signaling from an inverted repeat of endogenous genes in Arabidopsis

5 June 2018

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Epigenetic history of an Arabidopsis trans-silencer locus and a test for relay of trans-silencing activity

5 June 2018

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Analyses of single-copy Arabidopsis T-DNA-transformed lines show that the presence of vector backbone sequences, short inverted repeats and DNA methylation is not sufficient or necessary for the induction of transgene silencing

5 June 2018

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Two classes of short interfering RNA in RNA silencing

5 June 2018

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The influence of inverted repeats on the production of small antisense RNAs involved in gene silencing

5 June 2018

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Immunohistochemical study of DNA methylation dynamics during plant development

5 June 2018

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5 June 2018

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RNA silencing in plants--defense and counterdefense

5 June 2018

1 reference

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RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance

5 June 2018

1 reference

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A test for transvection in plants: DNA pairing may lead to trans-activation or silencing of complex heteroalleles in tobacco

5 June 2018

1 reference

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RNA-based silencing strategies in plants

5 June 2018

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Transcriptional gene silencing in plants: targets, inducers and regulators

5 June 2018

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Gene activation and gene silencing.

5 June 2018

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Transcriptional silencing and promoter methylation triggered by double-stranded RNA

5 June 2018

1 reference

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Transgene silencing by the host genome defense: implications for the evolution of epigenetic control mechanisms in plants and vertebrates

5 June 2018

1 reference

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RNA-directed DNA methylation.

5 June 2018

1 reference

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Epigenetic aspects of somaclonal variation in plants

5 June 2018

1 reference

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MethTools--a toolbox to visualize and analyze DNA methylation data

5 June 2018

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Drug-induced hypomethylation of a posttranscriptionally silenced transgene locus of tobacco leads to partial release of silencing

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

A species of small antisense RNA in posttranscriptional gene silencing in plants

5 June 2018

1 reference

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Gene silencing: repeats that count

5 June 2018

1 reference

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Heavy de novo methylation at symmetrical and non-symmetrical sites is a hallmark of RNA-directed DNA methylation

5 June 2018

1 reference

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Production of aberrant promoter transcripts contributes to methylation and silencing of unlinked homologous promoters in trans

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Position-dependent methylation and transcriptional silencing of transgenes in inverted T-DNA repeats: implications for posttranscriptional silencing of homologous host genes in plants

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Evidence for cytosine methylation of non-symmetrical sequences in transgenic Petunia hybrida

5 June 2018

1 reference

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Posttranscriptional silencing of reporter transgenes in tobacco correlates with DNA methylation

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Site-specific mutations alter in vitro factor binding and change promoter expression pattern in transgenic plants

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Consistent transcriptional silencing of 35S-driven transgenes in gentian

5 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Epigenetic switch from posttranscriptional to transcriptional silencing is correlated with promoter hypermethylation

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Formation of stable epialleles and their paramutation-like interaction in tetraploid Arabidopsis thaliana.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Studies on the effects of a flanking repetitive sequence on the expression of single-copy transgenes in Nicotiana sylvestris and in N. sylvestris-N. tomentosiformis hybrids

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

RNA target sequences promote spreading of RNA silencing.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

A Transcriptionally Active State Is Required for Post-Transcriptional Silencing (Cosuppression) of Nitrate Reductase Host Genes and Transgenes.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Disruption of their palindromic arrangement leads to selective loss of DNA methylation in inversely repeated gus transgenes in Arabidopsis.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Transgene silencing of invertedly repeated transgenes is released upon deletion of one of the transgenes involved.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Transcriptional and posttranscriptional gene silencing are mechanistically related

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Both sense and antisense RNAs are targets for the sense transgene-induced posttranscriptional silencing mechanism.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Disruption of the plant gene MOM releases transcriptional silencing of methylated genes

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Cross-talk between posttranscriptionally silenced neomycin phosphotransferase II transgenes.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Distinct features of post-transcriptional gene silencing by antisense transgenes in single copy and inverted T-DNA repeat loci.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Repeat-induced gene silencing in mammals.

18 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1456325

Transgene silencing may be mediated by aberrant sense promoter sequence transcripts generated from cryptic promoters

18 August 2018

1 reference

12 December 2020

Gene silencing mediated by promoter homology occurs at the level of transcription and results in meiotically heritable alterations in methylation and gene activity

1 reference

12 December 2020

DNA METHYLATION IN PLANTS

1 reference

12 December 2020

Neither inverted repeat T-DNA configurations nor arrangements of tandemly repeated transgenes are sufficient to trigger transgene silencing

1 reference

12 December 2020

An inverted repeat triggers cytosine methylation of identical sequences in Arabidopsis

1 reference

12 December 2020

A BamHI family of highly repeated DNA sequences of Nicotiana tabacum

1 reference

12 December 2020

Meiotic transmission of a hypomethylated repetitive DNA family in tobacco

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKL180

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16670434%20AND%20SRC:MED&resulttype=core&format=json

20 January 2020

PubMed publication ID

16670434

1 reference