(Q42095283)

English

A highly conserved Tyrosine residue of family B DNA polymerases contributes to dictate translesion synthesis past 8-oxo-7,8-dihydro-2'-deoxyguanosine

scientific article published on 25 July 2007

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

A highly conserved Tyrosine residue of family B DNA polymerases contributes to dictate translesion synthesis past 8-oxo-7,8-dihydro-2'-deoxyguanosine (English)

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

Margarita Salas

2

object named as

Margarita Salas

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

author name string

Miguel de Vega

1

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

publication date

25 July 2007

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

Nucleic Acids Research

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

35

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

15

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

5096-5107

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

Use of damaged DNA and dNTP substrates by the error-prone DNA polymerase X from African swine fever virus.

1 reference

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YtkD and MutT protect vegetative cells but not spores of Bacillus subtilis from oxidative stress

1 reference

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Stepwise translocation of Dpo4 polymerase during error-free bypass of an oxoG lesion

1 reference

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Efficient and high fidelity incorporation of dCTP opposite 7,8-dihydro-8-oxodeoxyguanosine by Sulfolobus solfataricus DNA polymerase Dpo4.

1 reference

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A lysine residue in the fingers subdomain of T7 DNA polymerase modulates the miscoding potential of 8-oxo-7,8-dihydroguanosine

1 reference

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29 May 2018

Mechanism of efficient and accurate nucleotide incorporation opposite 7,8-dihydro-8-oxoguanine by Saccharomyces cerevisiae DNA polymerase eta.

1 reference

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Insights into strand displacement and processivity from the crystal structure of the protein-primed DNA polymerase of bacteriophage phi29.

1 reference

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Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase

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Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase.

1 reference

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Escherichia coli DNA polymerase I (Klenow fragment) uses a hydrogen-bonding fork from Arg668 to the primer terminus and incoming deoxynucleotide triphosphate to catalyze DNA replication.

1 reference

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Lesion (in)tolerance reveals insights into DNA replication fidelity

1 reference

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Structures of mismatch replication errors observed in a DNA polymerase

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DNA replication fidelity

1 reference

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Erroneous incorporation of oxidized DNA precursors by Y-family DNA polymerases

1 reference

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29 May 2018

Yeast DNA polymerase zeta is an efficient extender of primer ends opposite from 7,8-dihydro-8-Oxoguanine and O6-methylguanine

1 reference

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29 May 2018

Oxidative nucleotide damage: consequences and prevention

1 reference

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Comprehensive human genome amplification using multiple displacement amplification

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Unique misinsertion specificity of poliota may decrease the mutagenic potential of deaminated cytosines

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Structure of the replicating complex of a pol alpha family DNA polymerase

1 reference

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Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification

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Genome maintenance mechanisms for preventing cancer

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DNA replication fidelity

1 reference

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29 May 2018

Efficient and accurate replication in the presence of 7,8-dihydro-8-oxoguanine by DNA polymerase eta.

1 reference

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29 May 2018

Oxyradicals and DNA damage

1 reference

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29 May 2018

8-oxodGTP incorporation by DNA polymerase beta is modified by active-site residue Asn279.

1 reference

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DNA polymerases: structural diversity and common mechanisms

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Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.

1 reference

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Steady-state and pre-steady-state kinetic analysis of 8-oxo-7,8-dihydroguanosine triphosphate incorporation and extension by replicative and repair DNA polymerases

1 reference

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Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

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Proliferating cell nuclear antigen: more than a clamp for DNA polymerases

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ø29 DNA polymerase residue Lys383, invariant at motif B of DNA-dependent polymerases, is involved in dNTP binding.

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Steady-state and pre-steady-state kinetic analysis of dNTP insertion opposite 8-oxo-7,8-dihydroguanine by Escherichia coli polymerases I exo- and II exo-.

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Fidelity of phi 29 DNA polymerase. Comparison between protein-primed initiation and DNA polymerization.

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Cloning and expression of cDNA for a human enzyme that hydrolyzes 8-oxo-dGTP, a mutagenic substrate for DNA synthesis

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Influence of 5'-nearest neighbors on the insertion kinetics of the fluorescent nucleotide analog 2-aminopurine by Klenow fragment

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Crystal structure of a DNA duplex containing 8-hydroxydeoxyguanine-adenine base pairs

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Escherichia coli thioredoxin stabilizes complexes of bacteriophage T7 DNA polymerase and primed templates

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A general structure for DNA-dependent DNA polymerases.

1 reference

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NMR studies of a DNA containing 8-hydroxydeoxyguanosine

1 reference

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1 reference

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Hydrolytic elimination of a mutagenic nucleotide, 8-oxodGTP, by human 18-kilodalton protein: sanitization of nucleotide pool

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MutT protein specifically hydrolyses a potent mutagenic substrate for DNA synthesis

1 reference

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DNA polymerase V allows bypass of toxic guanine oxidation products in vivo.

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The role of specific amino acid residues in the active site of Escherichia coli DNA polymerase I on translesion DNA synthesis across from and past an N-2-aminofluorene adduct.

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Thermostable DNA polymerases can perform translesion synthesis using 8-oxoguanine and tetrahydrofuran-containing DNA templates

1 reference

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Incorporation and replication of 8-oxo-deoxyguanosine by the human mitochondrial DNA polymerase

1 reference

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12 December 2020

based on heuristic

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Single-turnover kinetic analysis of the mutagenic potential of 8-oxo-7,8-dihydro-2'-deoxyguanosine during gap-filling synthesis catalyzed by human DNA polymerases lambda and beta

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652324

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR structural studies of the ionizing radiation adduct 7-hydro-8-oxodeoxyguanosine (8-oxo-7H-dG) opposite deoxyadenosine in a DNA duplex. 8-Oxo-7H-dG(syn).dA(anti) alignment at lesion site

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652324

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phi 29 DNA polymerase active site. Mutants in conserved residues Tyr254 and Tyr390 are affected in dNTP binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652324

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based on heuristic

inferred from PubMed ID database lookup

Purification of bacteriophage phi 29 DNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652324

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel kinetic analysis to calculate nucleotide affinity of proofreading DNA polymerases. Application to phi 29 DNA polymerase fidelity mutants

1 reference

https://pubmed.ncbi.nlm.nih.gov/17652324

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Replication of non-hydrogen bonded bases by DNA polymerases: a mechanism for steric matching

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKM545

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 October 2017

ResearchGate publication ID

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