(Q42110063)

16 October 2017

A novel representation of protein sequences for prediction of subcellular location using support vector machines (English)

1 reference

16 October 2017

support vector machine

1 reference

6

Tatsuya Akutsu

1 reference

16 October 2017

Setsuro Matsuda

1

1 reference

16 October 2017

Jean-Philippe Vert

2

1 reference

16 October 2017

Hiroto Saigo

3

1 reference

16 October 2017

Nobuhisa Ueda

4

1 reference

16 October 2017

Hiroyuki Toh

5

1 reference

16 October 2017

1 November 2005

1 reference

16 October 2017

1 reference

16 October 2017

14

1 reference

16 October 2017

11

1 reference

16 October 2017

2804-2813

1 reference

describes a project that uses

16 October 2017

support vector machine

1 reference

based on heuristic

inferred from title

cites work

Improved prediction of signal peptides: SignalP 3.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

ESLpred: SVM-based method for subcellular localization of eukaryotic proteins using dipeptide composition and PSI-BLAST.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Predicting subcellular localization of proteins in a hybridization space

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

A new hybrid approach to predict subcellular localization of proteins by incorporating gene ontology

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

NESbase version 1.0: a database of nuclear export signals

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Prediction of protein cellular attributes using pseudo-amino acid composition

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Multiple pathways used for the targeting of thylakoid proteins in chloroplasts.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

The InterPro database, an integrated documentation resource for protein families, domains and functional sites

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Chloroplast transit peptides: structure, function and evolution

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Protein import and routing systems of chloroplasts

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Protein subcellular location prediction

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Using discriminant function for prediction of subcellular location of prokaryotic proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Using neural networks for prediction of the subcellular location of proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Coatomer (COPI)-coated vesicles: role in intracellular transport and protein sorting.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Protein import into mitochondria

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Relation between amino acid composition and cellular location of proteins.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Prediction of Protein Structural Classes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Identification of common molecular subsequences

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

A general method applicable to the search for similarities in the amino acid sequence of two proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Optimal alignments in linear space

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Improved tools for biological sequence comparison

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Rapid and sensitive sequence comparison with FASTP and FASTA

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

A knowledge base for predicting protein localization sites in eukaryotic cells

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Multi-class support vector machines for protein secondary structure prediction.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Prediction of the subcellular localization of eukaryotic proteins using sequence signals and composition

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Predicting subcellular localization of proteins by hybridizing functional domain composition and pseudo-amino acid composition.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Support vector machine approach for protein subcellular localization prediction

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

Mitochondria-targeting sequence, a multi-role sorting sequence recognized at all steps of protein import into mitochondria

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2253224

PSLpred: prediction of subcellular localization of bacterial proteins

17 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1110%2FPS.051597405

Using Functional Domain Composition and Support Vector Machines for Prediction of Protein Subcellular Location

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1110%2FPS.051597405

Secretion of FGF-16 requires an uncleaved bipartite signal sequence

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16251364

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Prediction of protein subcellular locations using Markov chain models

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16251364

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1110/PS.051597405

1 reference

16 October 2017

1 reference

16 October 2017

PubMed publication ID

16251364

1 reference