(Q42134723)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

title

BeAtMuSiC: Prediction of changes in protein-protein binding affinity on mutations (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Dimitri Gilis

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

author name string

Jean Marc Kwasigroch

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

Marianne Rooman

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

publication date

30 May 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

volume

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

issue

Web Server issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

page(s)

W333-9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial 3.0 Unported

2 March 2020

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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Modulating protein-protein interactions: from structural determinants of binding to druggability prediction to application

29 May 2018

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Optimization of affinity, specificity and function of designed influenza inhibitors using deep sequencing

29 May 2018

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Computational prediction of protein hot spot residues

29 May 2018

1 reference

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The expanding view of protein-protein interactions: complexes involving intrinsically disordered proteins

29 May 2018

1 reference

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The diversity of physical forces and mechanisms in intermolecular interactions

29 May 2018

1 reference

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PoPMuSiC 2.1: a web server for the estimation of protein stability changes upon mutation and sequence optimality

29 May 2018

1 reference

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Computational Design of Proteins Targeting the Conserved Stem Region of Influenza Hemagglutinin

29 May 2018

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HotPoint: hot spot prediction server for protein interfaces

29 May 2018

1 reference

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APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility.

29 May 2018

1 reference

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PCRPi: Presaging Critical Residues in Protein interfaces, a new computational tool to chart hot spots in protein interfaces

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Prediction of hot spot residues at protein-protein interfaces by combining machine learning and energy-based methods

29 May 2018

1 reference

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Computational design of affinity and specificity at protein-protein interfaces

29 May 2018

1 reference

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A feature-based approach to modeling protein-protein interaction hot spots.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Identification of hot-spot residues in protein-protein interactions by computational docking

29 May 2018

1 reference

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Comprehensive in silico mutagenesis highlights functionally important residues in proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

KFC Server: interactive forecasting of protein interaction hot spots.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

The interface of protein-protein complexes: analysis of contacts and prediction of interactions

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Spatial chemical conservation of hot spot interactions in protein-protein complexes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Protein-protein interaction hotspots carved into sequences

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Hot spots--a review of the protein-protein interface determinant amino-acid residues

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

The molecular architecture of protein-protein binding sites.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

A new generation of statistical potentials for proteins.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Energy functions for protein design: adjustment with protein-protein complex affinities, models for the unfolded state, and negative design of solubility and specificity.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

CAPRI: a Critical Assessment of PRedicted Interactions

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Analysing six types of protein-protein interfaces

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

A simple physical model for binding energy hot spots in protein-protein complexes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Computational alanine scanning of the 1:1 human growth hormone-receptor complex

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

29 May 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Principles of protein-protein interactions

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

A hot spot of binding energy in a hormone-receptor interface

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Hydrophobicity of amino acid residues in globular proteins.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Prediction of hot spots in protein interfaces using a random forest model with hybrid features.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

KFC2: a knowledge-based hot spot prediction method based on interface solvation, atomic density, and plasticity features.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Fast and accurate predictions of protein stability changes upon mutations using statistical potentials and neural networks: PoPMuSiC-2.0.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Energy based approach for understanding the recognition mechanism in protein-protein complexes.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

HotSprint: database of computational hot spots in protein interfaces

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Computational alanine scanning of protein-protein interfaces

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Residue frequencies and pairing preferences at protein-protein interfaces.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Computational alanine scanning mutagenesis--an improved methodological approach

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3692068

Comparing experimental and computational alanine scanning techniques for probing a prototypical protein–protein interaction

3 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKT450

Structure-based mutant stability predictions on proteins of unknown structure

21 January 2018

1 reference

12 December 2020

Dissecting protein-protein recognition sites

1 reference

12 December 2020

18 Systematic mutational analyses of protein-protein interfaces

1 reference

12 December 2020

Interscaffolding additivity: binding of P1 variants of bovine pancreatic trypsin inhibitor to four serine proteases

1 reference

12 December 2020

Small-world network approach to identify key residues in protein-protein interaction

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKT450

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/DehouckKRG13

2 March 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

PubMed publication ID

23723246

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23723246%20AND%20SRC:MED&resulttype=core&format=json