(Q42140504)

17 October 2017

Spaced words and kmacs: fast alignment-free sequence comparison based on inexact word matches (English)

1 reference

17 October 2017

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

Martin Kollmar

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

4

Klas Hatje

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

author name string

Sebastian Horwege

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

Marcus Boden

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

Chris-André Leimeister

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

Burkhard Morgenstern

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

language of work or name

1 reference

14 May 2014

1 reference

17 October 2017

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

volume

42

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

issue

Web Server issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

page(s)

W7-11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 3.0 Unported

3 June 2020

copyright license

start time

10 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Kmacs: the k-mismatch average common substring approach to alignment-free sequence comparison

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Fast alignment-free sequence comparison using spaced-word frequencies.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Shared gene structures and clusters of mutually exclusive spliced exons within the metazoan muscle myosin heavy chain genes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Alignment-free phylogeny of whole genomes using underlying subwords

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

FastTree 2--approximately maximum-likelihood trees for large alignments

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Genomic DNA k-mer spectra: models and modalities

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Estimating mutation distances from unaligned genomes

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Pattern-based phylogenetic distance estimation and tree reconstruction.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Reconstructing the phylogeny of 21 completely sequenced arthropod species based on their motor proteins

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

The average common substring approach to phylogenomic reconstruction

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Genome comparison without alignment using shortest unique substrings

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Multiple sequence alignment with the Clustal series of programs

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Alignment-free sequence comparison-a review

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

PatternHunter: faster and more sensitive homology search

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

The rapid generation of mutation data matrices from protein sequences

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4086093

Algorithms on Strings, Trees, and Sequences

29 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKU398

Divergence measures based on the Shannon entropy

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKU398

21 January 2018

Identifiers

DOI

10.1093/NAR/GKU398

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

journals/nar/HorwegeLBHKLM14

3 June 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json

3 June 2020

PubMed publication ID

24829447

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24829447%20AND%20SRC:MED&resulttype=core&format=json