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A comparative cross-linking strategy to probe conformational changes in protein complexes
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scholarly article
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Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
title
A comparative cross-linking strategy to probe conformational changes in protein complexes
(English)
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stated in
Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
author
Carla Schmidt
object named as
Carla Schmidt
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1
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Carol V. Robinson
object named as
Carol V Robinson
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2
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publication date
21 August 2014
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stated in
Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
published in
Nature Protocols
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Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
volume
9
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stated in
Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
issue
9
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stated in
Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
page(s)
2224-2236
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Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
exact match
https://scigraph.springernature.com/pub.10.1038/nprot.2014.144
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cites work
A mass spectrometry-based hybrid method for structural modeling of protein complexes
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PubMed Central
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Analysis of amyloid nanostructures using photo-cross-linking: in situ comparison of three widely used photo-cross-linkers
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Protein crystallography for aspiring crystallographers or how to avoid pitfalls and traps in macromolecular structure determination
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Monitoring conformational changes in peroxisome proliferator-activated receptor α by a genetically encoded photoamino acid, cross-linking, and mass spectrometry
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Quantitative cross-linking/mass spectrometry using isotope-labelled cross-linkers
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Native tandem and ion mobility mass spectrometry highlight structural and modular similarities in clustered-regularly-interspaced shot-palindromic-repeats (CRISPR)-associated protein complexes from Escherichia coli and Pseudomonas aeruginosa
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Ion mobility-mass spectrometry for structural proteomics
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StavroX--a software for analyzing crosslinked products in protein interaction studies
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The beginning of a beautiful friendship: cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes
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Crosslinking combined with mass spectrometry for structural proteomics
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172966
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Database search algorithm for identification of intact cross-links in proteins and peptides using tandem mass spectrometry.
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Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry
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Identification of cross-linked peptides from large sequence databases
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Hydroxyl radical-mediated modification of proteins as probes for structural proteomics
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Quantitative mass spectrometry in proteomics: a critical review
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Chemical cross-linking and mass spectrometry to map three-dimensional protein structures and protein-protein interactions.
1 reference
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Hydrogen exchange mass spectrometry for the analysis of protein dynamics
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PubMed Central
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Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
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Intramolecular cross-linking experiments on cytochrome c and ribonuclease A using an isotope multiplet method.
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NMR spectroscopy of soluble protein complexes at one mega-dalton and beyond
1 reference
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PubMed Central
reference URL
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17 August 2018
Comparative cross-linking and mass spectrometry of an intact F-type ATPase suggest a role for phosphorylation.
1 reference
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reference URL
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Integrative modelling coupled with ion mobility mass spectrometry reveals structural features of the clamp loader in complex with single-stranded DNA binding protein.
1 reference
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reference URL
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retrieved
17 August 2018
Using multiple structural proteomics approaches for the characterization of prion proteins
1 reference
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PubMed Central
reference URL
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retrieved
17 August 2018
False discovery rate estimation for cross-linked peptides identified by mass spectrometry
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4172966
retrieved
17 August 2018
Structural Probing of a Protein Phosphatase 2A Network by Chemical Cross-Linking and Mass Spectrometry
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNPROT.2014.144
retrieved
31 March 2020
Identifiers
DOI
10.1038/NPROT.2014.144
1 reference
stated in
Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
Dimensions Publication ID
1039937328
0 references
PMCID
4172966
1 reference
stated in
Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
PubMed ID
25144272
1 reference
stated in
Europe PubMed Central
PMCID
4172966
retrieved
17 October 2017
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