(Q42175647)

English

Next-generation sequencing for typing and detection of resistance genes: performance of a new commercial method during an outbreak of extended-spectrum-beta-lactamase-producing Escherichia coli

scientific article published on 30 April 2014

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scholarly article

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Europe PubMed Central

PMC publication ID

18 October 2017

Next-generation sequencing for typing and detection of resistance genes: performance of a new commercial method during an outbreak of extended-spectrum-beta-lactamase-producing Escherichia coli (English)

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Europe PubMed Central

PMC publication ID

18 October 2017

Escherichia coli

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J Veenemans

1

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24789184%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

I T Overdevest

2

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24789184%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

I Willemsen

4

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Europe PubMed Central

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1 June 2020

Y Hendriks

5

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Europe PubMed Central

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1 June 2020

A Adesokan

6

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Europe PubMed Central

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1 June 2020

G Doran

7

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1 June 2020

S Bruso

8

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Europe PubMed Central

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1 June 2020

A Rolfe

9

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Europe PubMed Central

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1 June 2020

A Pettersson

10

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Europe PubMed Central

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1 June 2020

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publication date

30 April 2014

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18 October 2017

Journal of Clinical Microbiology

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1 June 2020

52

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1 June 2020

7

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Europe PubMed Central

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1 June 2020

2454-2460

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Europe PubMed Central

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1 June 2020

Rapid resistome fingerprinting and clonal lineage profiling of carbapenem-resistant Klebsiella pneumoniae isolates by targeted next-generation sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

Overview of molecular typing methods for outbreak detection and epidemiological surveillance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

Improved multiplex PCR strategy for rapid assignment of the four major Escherichia coli phylogenetic groups.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

Molecular epidemiological analysis of Escherichia coli sequence type ST131 (O25:H4) and blaCTX-M-15 among extended-spectrum-β-lactamase-producing E. coli from the United States, 2000 to 2009.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

Colonization with extended-spectrum β-lactamase-producing Escherichia coli and Klebsiella species in long-term care facility residents

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

Extended-spectrum β-lactamase genes of Escherichia coli in chicken meat and humans, The Netherlands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

Increasing prevalence of ESBL-producing Enterobacteriaceae in Europe.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

The spread of CTX-M-type extended-spectrum beta-lactamases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

CTX-M: changing the face of ESBLs in Europe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

Sex and virulence in Escherichia coli: an evolutionary perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

26 October 2017

The Clermont Escherichia coli phylo-typing method revisited: improvement of specificity and detection of new phylo-groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

17 August 2018

Antimicrobial resistance in long-term care facilities.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

17 August 2018

Real-time PCR for detection of the O25b-ST131 clone of Escherichia coli and its CTX-M-15-like extended-spectrum beta-lactamases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

17 August 2018

Guidelines for the validation and application of typing methods for use in bacterial epidemiology

1 reference

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17 August 2018

Amplified-fragment length polymorphism analysis of Propionibacterium isolates implicated in contamination of blood products.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

17 August 2018

Fast optimal leaf ordering for hierarchical clustering.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

17 August 2018

Bacterial fitness and plasmid loss: the importance of culture conditions and plasmid size

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4097710

17 August 2018

Rapid detection of TEM, SHV and CTX-M extended-spectrum beta-lactamases in Enterobacteriaceae using ligation-mediated amplification with microarray analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24789184

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of a DNA microarray for the rapid detection of extended-spectrum -lactamases (TEM, SHV and CTX-M), plasmid-mediated cephalosporinases (CMY-2-like, DHA, FOX, ACC-1, ACT/MIR and CMY-1-like/MOX) and carbapenemases (KPC, OXA-48, VIM, IMP and N

1 reference

https://pubmed.ncbi.nlm.nih.gov/24789184

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JCM.00313-14

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24789184%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24789184%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24789184%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

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