(Q42266803)

19 October 2017

Clustergrammer, a web-based heatmap visualization and analysis tool for high-dimensional biological data (English)

1 reference

19 October 2017

0 references

1 reference

Peter Hornbeck

6

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Avi Ma'ayan

object named as

Avi Ma'ayan

7

0 references

Adeeb H. Rahman

3

object named as

Adeeb Rahman

1 reference

19 October 2017

5

Klarisa Rikova

1 reference

19 October 2017

Nicolas F Fernandez

1

1 reference

19 October 2017

Gregory W Gundersen

2

1 reference

19 October 2017

Mark L Grimes

4

1 reference

19 October 2017

10 October 2017

1 reference

19 October 2017

1 reference

19 October 2017

4

1 reference

19 October 2017

170151

1 reference

Creative Commons Attribution 4.0 International

19 October 2017

start time

10 October 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Jupyter notebook file

1 reference

shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

L1000CDS2: LINCS L1000 characteristic direction signatures search engine

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

GEN3VA: aggregation and analysis of gene expression signatures from related studies

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Mass cytometry: blessed with the curse of dimensionality.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Heat*seq: an interactive web tool for high-throughput sequencing experiment comparison with public data

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

The harmonizome: a collection of processed datasets gathered to serve and mine knowledge about genes and proteins

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

GEO2Enrichr: browser extension and server app to extract gene sets from GEO and analyze them for biological functions

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

InCHlib – interactive cluster heatmap for web applications

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

QCanvas: An Advanced Tool for Data Clustering and Visualization of Genomics Data

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

D³: Data-Driven Documents

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Introduction to statistical methods to analyze large data sets: principal components analysis

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Gitools: analysis and visualisation of genomic data using interactive heat-maps

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

A survey of visualization tools for biological network analysis

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Neuronal characteristics of small-cell lung cancer

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Java Treeview--extensible visualization of microarray data

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Gene ontology: tool for the unification of biology

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Cluster analysis and display of genome-wide expression patterns

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Tumour promoter phorbol-12-myristate-13-acetate induces chromosomal damage via indirect action

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

An adherent subline of a unique small-cell lung cancer cell line downregulates antigens of the neural cell adhesion molecule

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Fate of immunoprecipitable protein kinase C in GH3 cells treated with phorbol 12-myristate 13-acetate

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

jHeatmap: an interactive heatmap viewer for the web.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5634325

Matplotlib: A 2D Graphics Environment

17 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FSDATA.2017.151

21 January 2018

Identifiers

DOI

10.1038/SDATA.2017.151

1 reference

19 October 2017

1 reference

19 October 2017

PubMed publication ID

28994825

1 reference