(Q42285636)

English

Post-transcriptional modifications in the small subunit ribosomal RNA from Thermotoga maritima, including presence of a novel modified cytidine

scientific article published on 25 January 2007

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

Post-transcriptional modifications in the small subunit ribosomal RNA from Thermotoga maritima, including presence of a novel modified cytidine (English)

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

post-transcriptional modification

0 references

1 reference

based on heuristic

inferred from title

Thermotoga maritima

object named as

Thermotoga maritima

1 reference

based on heuristic

inferred from title

Steven C Pomerantz

2

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

author name string

Rebecca Guymon

1

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

J Nicholas Ison

3

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

Pamela F Crain

4

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

James A McCloskey

5

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

language of work or name

0 references

publication date

25 January 2007

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

13

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

3

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

396-403

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

The Small Subunit rRNA Modification Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Decoding the genome: a modified view

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Influence of temperature on tRNA modification in archaea: Methanococcoides burtonii (optimum growth temperature [Topt], 23 degrees C) and Stetteria hydrogenophila (Topt, 95 degrees C).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

rRNA modifications and ribosome function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Post-transcriptional modification in archaeal tRNAs: identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

The phylogenetic relationships of three sulfur dependent archaebacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Thermotoga heats up lateral gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Evidence for lateral gene transfer between Archaea and Bacteria from genome sequence of Thermotoga maritima

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Posttranscriptional modifications in 16S and 23S rRNAs of the archaeal hyperthermophile Sulfolobus solfataricus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Stabilization of RNA stacking by pseudouridine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Probing structural differences between native and in vitro transcribed Escherichia coli valine transfer RNA: evidence for stable base modification-dependent conformers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

The single pseudouridine residue inEscherichia coli16S RNA is located at position 516

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Summary: the modified nucleosides of RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

The role of posttranscriptional modification in stabilization of transfer RNA from hyperthermophiles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

The effects of methionine deprivation on ribosome synthesis in HeLa cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

The numerous modified nucleotides in eukaryotic ribosomal RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

26 October 2017

Ribosome activity and modification of 16S RNA are influenced by deletion of ribosomal protein S20.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

29 May 2018

Modifications in Thermus thermophilus 23 S ribosomal RNA are centered in regions of RNA-RNA contact.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

17 August 2018

Influence of phylogeny on posttranscriptional modification of rRNA in thermophilic prokaryotes: the complete modification map of 16S rRNA of Thermus thermophilus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

17 August 2018

Detection of the common RNA nucleoside pseudouridine in mixtures of oligonucleotides by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

17 August 2018

Identities and phylogenetic comparisons of posttranscriptional modifications in 16 S ribosomal RNA from Haloferax volcanii.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

17 August 2018

In vitro complementation analysis localizes 23S rRNA posttranscriptional modifications that are required for Escherichia coli 50S ribosomal subunit assembly and function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1800508

17 August 2018

Identification of bases in 16S rRNA essential for tRNA binding at the 30S ribosomal P site

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence of the 16S Ribosomal RNA from Halobacterium volcanii, an Archaebacterium

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of RNA hydrolyzates by liquid chromatography-mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Clustering of modified nucleotides at the functional center of bacterial ribosomal RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The absence of modified nucleotides affects both in vitro assembly and in vitro function of the 30S ribosomal subunit of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preparation and enzymatic hydrolysis of DNA and RNA for mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional requirement of a site-specific ribose methylation in ribosomal RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Implications of a functional large ribosomal RNA with only three modified nucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational rigidity of specific pyrimidine residues in tRNA arises from posttranscriptional modifications that enhance steric interaction between the base and the 2'-hydroxyl group

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tandem Mass Spectrometry of Small, Multiply Charged Oligonucleotides

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles

1 reference

https://pubmed.ncbi.nlm.nih.gov/17255199

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1261/RNA.361607

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

19 October 2017

ResearchGate publication ID

0 references

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