(Q42317468)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

title

The transcriptional signature of human ovarian carcinoma macrophages is associated with extracellular matrix reorganization (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

0 references

1 reference

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Thorsten Stiewe

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Rolf Müller

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Rolf Müller

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

author name string

Florian Finkernagel

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Silke Reinartz

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Sonja Lieber

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Annika Wortmann

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Nathalie Hoffmann

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Tim Bieringer

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Andrea Nist

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Julia M Jansen

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Uwe Wagner

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

Sabine Müller-Brüsselbach

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

language of work or name

English

0 references

publication date

1 November 2016

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

volume

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

issue

46

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

page(s)

75339-75352

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

23 March 2020

edgeR

object named as

edgeR

Bioconductor package edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

edgeR

0 references

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25 October 2017

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A multi-stage process including transient polyploidization and EMT precedes the emergence of chemoresistent ovarian carcinoma cells with a dedifferentiated and pro-inflammatory secretory phenotype

25 October 2017

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Revisiting mouse peritoneal macrophages: heterogeneity, development, and function

25 October 2017

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Lysyl Oxidase Activity Is Required for Ordered Collagen Fibrillogenesis by Tendon Cells

25 October 2017

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The transcriptional PPARβ/δ network in human macrophages defines a unique agonist-induced activation state

25 October 2017

1 reference

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Tissue-resident macrophages: then and now.

25 October 2017

1 reference

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Connecting prognostic ligand receptor signaling loops in advanced ovarian cancer

25 October 2017

1 reference

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Fragile TIM-4-expressing tissue resident macrophages are migratory and immunoregulatory.

25 October 2017

1 reference

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Tumor-associated macrophages contribute to tumor progression in ovarian cancer.

25 October 2017

1 reference

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Clodronate inhibits tumor angiogenesis in mouse models of ovarian cancer

25 October 2017

1 reference

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The cellular and molecular origin of tumor-associated macrophages

25 October 2017

1 reference

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In situ proliferation contributes to accumulation of tumor-associated macrophages in spontaneous mammary tumors

25 October 2017

1 reference

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Risk prediction for late-stage ovarian cancer by meta-analysis of 1525 patient samples.

25 October 2017

1 reference

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A signature predicting poor prognosis in gastric and ovarian cancer represents a coordinated macrophage and stromal response

25 October 2017

1 reference

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Transcriptome-based network analysis reveals a spectrum model of human macrophage activation.

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

A collagen-remodeling gene signature regulated by TGF-β signaling is associated with metastasis and poor survival in serous ovarian cancer

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Getting to know ovarian cancer ascites: opportunities for targeted therapy-based translational research

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Lumican affects tumor cell functions, tumor-ECM interactions, angiogenesis and inflammatory response

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Tissue-resident macrophages

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Mixed-polarization phenotype of ascites-associated macrophages in human ovarian carcinoma: correlation of CD163 expression, cytokine levels and early relapse

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Macrophage biology in development, homeostasis and disease

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Procollagen C-proteinase enhancer grasps the stalk of the C-propeptide trimer to boost collagen precursor maturation

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

The regulatory roles of small leucine-rich proteoglycans in extracellular matrix assembly

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Fate mapping reveals origins and dynamics of monocytes and tissue macrophages under homeostasis

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Tissues use resident dendritic cells and macrophages to maintain homeostasis and to regain homeostasis upon tissue injury: the immunoregulatory role of changing tissue environments.

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

STAR: ultrafast universal RNA-seq aligner

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

A lineage of myeloid cells independent of Myb and hematopoietic stem cells

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Coordinated regulation of myeloid cells by tumours

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Macrophage plasticity and polarization: in vivo veritas

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

A dynamic inflammatory cytokine network in the human ovarian cancer microenvironment

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Origin and Functions of Tumor-Associated Myeloid Cells (TAMCs).

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Procollagen C-proteinase enhancer stimulates procollagen processing by binding to the C-propeptide region only

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Integrated genomic analyses of ovarian carcinoma

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Immunity and immune suppression in human ovarian cancer

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Removing batch effects in analysis of expression microarray data: an evaluation of six batch adjustment methods

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Involvement of M2‐polarized macrophages in the ascites from advanced epithelial ovarian carcinoma in tumor progression via Stat3 activation

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Proliferating macrophages associated with high grade, hormone receptor negative breast cancer and poor clinical outcome

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Ovarian cancer development and metastasis

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Newly diagnosed and relapsed epithelial ovarian carcinoma: ESMO Clinical Practice Guidelines for diagnosis, treatment and follow-up

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Phosphatidylserine receptor Tim-4 is essential for the maintenance of the homeostatic state of resident peritoneal macrophages

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Macrophage diversity enhances tumor progression and metastasis

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Two physically, functionally, and developmentally distinct peritoneal macrophage subsets

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

The tumor-promoting actions of TNF-alpha involve TNFR1 and IL-17 in ovarian cancer in mice and humans

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Regulation of macrophage function in tumors: the multifaceted role of NF-kappaB.

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Mining the ovarian cancer ascites proteome for potential ovarian cancer biomarkers

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

"Re-educating" tumor-associated macrophages by targeting NF-kappaB.

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Identification of Tim4 as a phosphatidylserine receptor

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Moderated statistical tests for assessing differences in tag abundance

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Macrophages mediate inflammation-enhanced metastasis of ovarian tumors in mice

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

The inflammatory cytokine tumor necrosis factor-alpha generates an autocrine tumor-promoting network in epithelial ovarian cancer cells

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Adjusting batch effects in microarray expression data using empirical Bayes methods

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Apoptotic cell removal in development and tissue homeostasis

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Macrophages: Obligate Partners for Tumor Cell Migration, Invasion, and Metastasis

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

A distinct and unique transcriptional program expressed by tumor-associated macrophages (defective NF-kappaB and enhanced IRF-3/STAT1 activation).

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Ovarian carcinoma spheroids disaggregate on type I collagen and invade live human mesothelial cell monolayers

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Tumour-educated macrophages promote tumour progression and metastasis

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Macrophage polarization: tumor-associated macrophages as a paradigm for polarized M2 mononuclear phagocytes

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Peripheral blood but not tissue dendritic cells express CD52 and are depleted by treatment with alemtuzumab

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Contributions of stromal metalloproteinase-9 to angiogenesis and growth of human ovarian carcinoma in mice

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

The transcription factor Gata6 links tissue macrophage phenotype and proliferative renewal

25 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Collagen degradation products measured in serum can separate ovarian and breast cancer patients from healthy controls: A preliminary study.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Meta-analysis of transcriptome reveals let-7b as an unfavorable prognostic biomarker and predicts molecular and clinical subclasses in high-grade serous ovarian carcinoma.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

A distinguishing gene signature shared by tumor-infiltrating Tie2-expressing monocytes, blood "resident" monocytes, and embryonic macrophages suggests common functions and developmental relationships

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Macrophages promote collagen fibrillogenesis around terminal end buds of the developing mammary gland.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Ovarian carcinoma ascites spheroids adhere to extracellular matrix components and mesothelial cell monolayers

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Complementary suppression of T cell activation by peritoneal macrophages and CTLA-4-Ig

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

Role of Macrophage Targeting in the Antitumor Activity of Trabectedin

3 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

p50 Nuclear Factor- B Overexpression in Tumor-Associated Macrophages Inhibits M1 Inflammatory Responses and Antitumor Resistance

1 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5342745

The origin and function of tumor-associated macrophages

1 December 2018

1 reference

12 December 2020

Human peritoneal macrophages show functional characteristics of M-CSF-driven anti-inflammatory type 2 macrophages

1 reference

12 December 2020

Antigen-presenting capacity of macrophages and dendritic cells in the peritoneal cavity of patients treated with peritoneal dialysis

1 reference

12 December 2020

Antigen presentation by peritoneal macrophages from young adult and old mice

1 reference

12 December 2020

Interleukin-1 production and antigen presentation by normal human peritoneal macrophages

1 reference

12 December 2020

Antigen presentation by cisplatin-activated macrophages: role of soluble factor(s) and second messengers

1 reference

12 December 2020

Defective antitumor function of monocyte-derived macrophages from epithelial ovarian cancer patients

1 reference

12 December 2020

10.18632/ONCOTARGET.12180

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27659538%20AND%20SRC:MED&resulttype=core&format=json

23 March 2020

PubMed publication ID

27659538

1 reference