(Q42321235)

26 October 2017

Graph spectral analysis of protein interaction network evolution (English)

1 reference

26 October 2017

0 references

Thomas Thorne

1

0 references

Michael Stumpf

series ordinal

2

object named as

Michael P H Stumpf

1 reference

26 October 2017

2 May 2012

1 reference

Journal of the Royal Society Interface

26 October 2017

1 reference

26 October 2017

9

1 reference

26 October 2017

75

1 reference

26 October 2017

2653-2666

1 reference

Simulation-based model selection for dynamical systems in systems and population biology

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Model criticism based on likelihood-free inference, with an application to protein network evolution

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Cliques and duplication-divergence network growth.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Using likelihood-free inference to compare evolutionary dynamics of the protein networks of H. pylori and P. falciparum

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregressive process

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

The effects of incomplete protein interaction data on structural and evolutionary inferences

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

A likelihood approach to analysis of network data

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Some protein interaction data do not exhibit power law statistics

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Duplication-divergence model of protein interaction network.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Subnets of scale-free networks are not scale-free: sampling properties of networks

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Inferring network mechanisms: the Drosophila melanogaster protein interaction network

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Evidence for dynamically organized modularity in the yeast protein-protein interaction network

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Classification of scale-free networks

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Emergence of Scaling in Random Networks

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Fitting a geometric graph to a protein-protein interaction network.

26 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical gaussian models and bayesian networks.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427518

Statistical mechanics of complex networks

17 August 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0220

Sequential Monte Carlo samplers

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0220

Modeling of Protein Interaction Networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0220

Are randomly grown graphs really random?

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSIF.2012.0220

How scale-free are biological networks

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22552917

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evolving protein interaction networks through gene duplication

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22552917

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1098/RSIF.2012.0220

1 reference

26 October 2017

1 reference

26 October 2017

1 reference

PMCID

3427518