(Q42355543)

28 October 2017

H3K4me3 inversely correlates with DNA methylation at a large class of non-CpG-island-containing start sites (English)

1 reference

28 October 2017

0 references

11

Gregory E Crawford

1 reference

28 October 2017

3

Lingyun Song

1 reference

28 October 2017

Dheepa Balasubramanian

1

1 reference

28 October 2017

Batool Akhtar-Zaidi

2

1 reference

28 October 2017

Cynthia F Bartels

4

1 reference

28 October 2017

Martina Veigl

5

1 reference

28 October 2017

Lydia Beard

6

1 reference

28 October 2017

Lois Myeroff

7

1 reference

28 October 2017

Kishore Guda

8

1 reference

28 October 2017

James Lutterbaugh

9

1 reference

28 October 2017

Joseph Willis

10

1 reference

28 October 2017

Sanford D Markowitz

12

1 reference

28 October 2017

Peter C Scacheri

13

1 reference

28 October 2017

28 May 2012

1 reference

28 October 2017

1 reference

28 October 2017

4

1 reference

28 October 2017

5

1 reference

28 October 2017

47

1 reference

https://scigraph.springernature.com/pub.10.1186/gm346

28 October 2017

0 references

cites work

DNA methylation directly silences genes with non-CpG island promoters and establishes a nucleosome occupied promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

KDM1B is a histone H3K4 demethylase required to establish maternal genomic imprints

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

The lysine demethylase LSD1 (KDM1) is required for maintenance of global DNA methylation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

F-Seq: a feature density estimator for high-throughput sequence tags

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Frequent switching of Polycomb repressive marks and DNA hypermethylation in the PC3 prostate cancer cell line

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Mapping short DNA sequencing reads and calling variants using mapping quality scores

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Bone morphogenic protein 3 inactivation is an early and frequent event in colorectal cancer development.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

High-resolution mapping and characterization of open chromatin across the genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

RNA polymerase is poised for activation across the genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

A chromatin landmark and transcription initiation at most promoters in human cells

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

DNA methylation dictates histone H3K4 methylation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Genome-wide analysis of menin binding provides insights into MEN1 tumorigenesis

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Promoter features related to tissue specificity as measured by Shannon entropy

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Biallelic inactivation of hMLH1 by epigenetic gene silencing, a novel mechanism causing human MSI cancers.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Cell culture of human colon adenomas and carcinomas.

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation

29 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

CDX1 expression is reduced in colorectal carcinoma and is associated with promoter hypermethylation.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3506913

Tissue-specific demethylation in CpG-poor promoters during cellular differentiation

17 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22640407

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GM346

1 reference

Dimensions Publication ID

28 October 2017

0 references

1 reference

28 October 2017

PubMed publication ID

22640407

1 reference