(Q42418679)

30 October 2017

The naturally occurring N6-threonyl adenine in anticodon loop of Schizosaccharomyces pombe tRNAi causes formation of a unique U-turn motif (English)

1 reference

Schizosaccharomyces pombe

30 October 2017

object named as

Schizosaccharomyces pombe

1 reference

5

1 reference

30 October 2017

Eveline Lescrinier

1

0 references

Piet Herdewijn

object named as

Piet Herdewijn

6

0 references

author name string

Koen Nauwelaerts

2

1 reference

PMCID

1474066

30 October 2017

Katia Zanier

3

1 reference

PMCID

1474066

30 October 2017

Koen Poesen

4

1 reference

30 October 2017

31 May 2006

1 reference

30 October 2017

Nucleic Acids Research

1 reference

30 October 2017

34

1 reference

30 October 2017

10

1 reference

30 October 2017

2878-2886

1 reference

The Xplor-NIH NMR molecular structure determination package

30 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

The crystal structure of HIV reverse-transcription primer tRNA(Lys,3) shows a canonical anticodon loop

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Functional anticodon architecture of human tRNALys3 includes disruption of intraloop hydrogen bonding by the naturally occurring amino acid modification, t6A

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

A-form conformational motifs in ligand-bound DNA structures

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Database of non-canonical base pairs found in known RNA structures

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Initiation of translation in prokaryotes and eukaryotes

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Stabilization of the anticodon stem-loop of tRNALys,3 by an A+-C base-pair and by pseudouridine

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

An extensively modified version of MolScript that includes greatly enhanced coloring capabilities

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

On the conformation of the anticodon loops of initiator and elongator methionine tRNAs

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

A network of heterogeneous hydrogen bonds in GNRA tetraloops

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Identification of 2'-hydroxyl groups required for interaction of a tRNA anticodon stem-loop region with the ribosome

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

The primary structure of cytoplasmic initiator tRNA(Met) from Schizosaccharomyces pombe

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

A general enhancement scheme in heteronuclear multidimensional NMR employing pulsed field gradients

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Initiation factors in protein biosynthesis

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Effect of threonylcarbamoyl modification (t6A) in yeast tRNA Arg III on codon-anticodon and anticodon-anticodon interactions. A thermodynamic and kinetic evaluation

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Improved spectral resolution in cosy 1H NMR spectra of proteins via double quantum filtering

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Three-Dimensional Tertiary Structure of Yeast Phenylalanine Transfer RNA

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Information content of binding sites on nucleotide sequences

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Defining the structure of irregular nucleic acids: conventions and principles

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

The 3 A crystal structure of yeast initiator tRNA: functional implications in initiator/elongator discrimination

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Analysis of magnesium, europium and lead binding sites in methionine initiator and elongator tRNAs by specific metal-ion-induced cleavages.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Nucleotide sequence of N-formyl-methionyl-transfer RNA.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Cytoplasmic methionine transfer RNAs from eukaryotes.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Structural effects of hypermodified nucleosides in the Escherichia coli and human tRNALys anticodon loop: the effect of nucleosides s2U, mcm5U, mcm5s2U, mnm5s2U, t6A, and ms2t6A.

28 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

The role of modifications in codon discrimination by tRNA(Lys)UUU.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Prediction of proton chemical shifts in RNA. Their use in structure refinement and validation.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Conformational analysis of single-base bulges in A-form DNA and RNA using a hierarchical approach and energetic evaluation with a continuum solvent model.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

Torsion-angle molecular dynamics as a new efficient tool for NMR structure calculation.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1474066

AUG is the only recognisable signal sequence in the 5′ non-coding regions of eukaryotic mRNA

16 August 2018

1 reference

12 December 2020

Assignment of the 31P and 1H resonances in oligonucleotides by two-dimensional NMR spectroscopy

1 reference

12 December 2020

tRNAi(met) functions in directing the scanning ribosome to the start site of translation

1 reference

12 December 2020

Structure of a hexanucleotide RNA hairpin loop conserved in ribosomal RNAs

1 reference

12 December 2020

Structural features of a six-nucleotide RNA hairpin loop found in ribosomal RNA

1 reference

12 December 2020

Discrimination by Escherichia coli initiation factor IF3 against initiation on non-canonical codons relies on complementarity rules

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKL081

1 reference

30 October 2017

1 reference

30 October 2017

1 reference

PMCID

1474066