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The origin of short transcriptional pauses
scientific article published on March 2009
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
title
The origin of short transcriptional pauses
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
author
Eric A Galburt
object named as
Eric A Galburt
series ordinal
2
0 references
Stephan Grill
series ordinal
3
object named as
Stephan W Grill
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
Martin Depken
series ordinal
1
object named as
Martin Depken
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
language of work or name
English
0 references
publication date
1 March 2009
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
published in
Biophysical Journal
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
volume
96
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
issue
6
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
page(s)
2189-2193
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
cites work
Sequence heterogeneity and the dynamics of molecular motors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Thermal probing of E. coli RNA polymerase off-pathway mechanisms
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Single-molecule studies of RNA polymerase: motoring along
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Transcript-assisted transcriptional proofreading
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Sequence-resolved detection of pausing by single RNA polymerase molecules.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Thermodynamic and kinetic modeling of transcriptional pausing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Direct observation of base-pair stepping by RNA polymerase
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Thinking quantitatively about transcriptional regulation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Backtracking by single RNA polymerase molecules observed at near-base-pair resolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Regulation by transcription attenuation in bacteria: how RNA provides instructions for transcription termination/antitermination decisions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Transcriptional fidelity and proofreading by RNA polymerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Transcriptional arrest: Escherichia coli RNA polymerase translocates backward, leaving the 3' end of the RNA intact and extruded
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Multiple interactions stabilize a single paused transcription intermediate in which hairpin to 3' end spacing distinguishes pause and termination pathways.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
28 May 2018
Fluctuations, pauses, and backtracking in DNA transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
16 August 2018
Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
16 August 2018
Ubiquitous transcriptional pausing is independent of RNA polymerase backtracking.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
16 August 2018
RNA polymerase switches between inactivated and activated states By translocating back and forth along the DNA and the RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
16 August 2018
The RNA-DNA hybrid maintains the register of transcription by preventing backtracking of RNA polymerase.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2717293
retrieved
16 August 2018
A central role of the RNA polymerase trigger loop in active-site rearrangement during transcriptional pausing
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19289045
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Sequence-dependent kinetic model for transcription elongation by RNA polymerase
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19289045
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1016/J.BPJ.2008.12.3918
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
PMCID
2717293
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
PubMed ID
19289045
1 reference
stated in
Europe PubMed Central
PMCID
2717293
retrieved
3 November 2017
ResearchGate publication ID
24203450
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