(Q42607858)

3 November 2017

Deciphering environmental signal integration in sigma54-dependent promoters with a simple mathematical model (English)

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3 November 2017

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2

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3 November 2017

Stephen J Van Dien

1

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3 November 2017

language of work or name

English

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publication date

1 October 2003

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Journal of Theoretical Biology

3 November 2017

13

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based on heuristic

inferred from page(s)

published in

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3 November 2017

224

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3 November 2017

4

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3 November 2017

437-449

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maintained by WikiProject

3 November 2017

WikiProject Mathematics

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cites work

Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

In vivo and in vitro effects of (p)ppGpp on the sigma(54) promoter Pu of the TOL plasmid of Pseudomonas putida.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Involvement of sigma 54 in exponential silencing of the Pseudomonas putida TOL plasmid Pu promoter.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Evidence of multiple regulatory functions for the PtsN (IIA(Ntr)) protein of Pseudomonas putida

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Single amino acids changes in the signal receptor domain of XylR resulted in mutants that stimulate transcription in the absence of effectors.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Activation of the transcriptional regulator XylR of Pseudomonas putida by release of repression between functional domains.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Monitoring intracellular levels of XylR in Pseudomonas putida with a single-chain antibody specific for aromatic-responsive enhancer-binding proteins.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Strength and regulation without transcription factors: lessons from bacterial rRNA promoters

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Upstream binding sequences of the XylR activator protein and integration host factor in the xylS gene promoter region of the Pseudomonas TOL plasmid

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Carbon source-dependent inhibition of xyl operon expression of the Pseudomonas putida TOL plasmid

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Growth-phase-dependent expression of the Pseudomonas putida TOL plasmid pWW0 catabolic genes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Expression of the regulatory gene xylS on the TOL plasmid is positively controlled by the xylR gene product

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

A stationary phase protein in Escherichia coli with binding activity to the major sigma subunit of RNA polymerase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Regulation of sigma factor competition by the alarmone ppGpp

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Biosynthesis of RNA polymerase in Escherichia coli. IX. Growth-dependent variations in the synthesis rate, content and distribution of RNA polymerase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

The regulation of nitrogen utilization in enteric bacteria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Transcriptional control of the Pseudomonas putida TOL plasmid catabolic pathways

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Mechanism and control of transcription initiation in prokaryotes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

The Escherichia coli phage-shock-protein (psp) operon

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

In Vitro Activities of an N-terminal Truncated Form of XylR, a σ54-dependent Transcriptional Activator of Pseudomonas putida

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Genetics and biochemistry of phenol degradation by Pseudomonas sp. CF600.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid-encoded regulators

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Sensing of aromatic compounds by the DmpR transcriptional activator of phenol-catabolizing Pseudomonas sp. strain CF600

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Cloning and nucleotide sequence of the gene encoding the positive regulator (DmpR) of the phenol catabolic pathway encoded by pVI150 and identification of DmpR as a member of the NtrC family of transcriptional activators

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

The alarmone (p)ppGpp mediates physiological-responsive control at the sigma 54-dependent Po promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

In vivo and in vitro effects of integration host factor at the DmpR-regulated sigma(54)-dependent Po promoter

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Integration of global regulation of two aromatic-responsive sigma(54)-dependent systems: a common phenotype by different mechanisms.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

In vivo UV laser footprinting of the Pseudomonas putidasigma 54Pu promoter reveals that integration host factor couples transcriptional activity to growth phase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0022-5193%2803%2900191-7

inferred from DOI database lookup

7 January 2021

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Identifiers

DOI

10.1016/S0022-5193(03)00191-7

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release_wa2t6zctxbghzltfu5ayxoanmi

3 November 2017

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24 November 2022

based on heuristic

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