(Q42623554)

English

The conserved chimeric transcript UPGRADE2 is associated with unreduced pollen formation and is exclusively found in apomictic Boechera species.

scientific article published on 15 October 2013

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27 February 2020

The conserved chimeric transcript UPGRADE2 is associated with unreduced pollen formation and is exclusively found in apomictic Boechera species (English)

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27 February 2020

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27 February 2020

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27 February 2020

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27 February 2020

Markus Kuhlmann

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27 February 2020

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Heiko Vogel

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27 February 2020

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José M Corral

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27 February 2020

Nico de Storme

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27 February 2020

Danny Geelen

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27 February 2020

Timothy F Sharbel

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27 February 2020

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15 October 2013

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27 February 2020

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20

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Plant Physiology

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27 February 2020

163

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27 February 2020

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27 February 2020

1640-1659

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27 February 2020

Novel microRNAs and microsatellite-like small RNAs in sexual and apomictic Boechera species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Copy number variation in transcriptionally active regions of sexual and apomictic Boechera demonstrates independently derived apomictic lineages.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

A conserved apomixis-specific polymorphism is correlated with exclusive exonuclease expression in premeiotic ovules of apomictic boechera species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Volume-based pollen size analysis: an advanced method to assess somatic and gametophytic ploidy in flowering plants

1 reference

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30 September 2018

Differential effects of polyploidy and diploidy on fitness of apomictic Boechera.

1 reference

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30 September 2018

Analysis of conserved microRNAs in floral tissues of sexual and apomictic Boechera species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Selection of reference genes for quantitative real-time PCR expression studies of microdissected reproductive tissues in apomictic and sexual Boechera

1 reference

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30 September 2018

Sexual reproduction, hybridization, apomixis, and polyploidization in the genus Boechera (Brassicaceae).

1 reference

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30 September 2018

Colonizing the American continent: Systematics of the genus Arabis in North America (Brassicaceae).

1 reference

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30 September 2018

CpG islands and the regulation of transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Synthetic clonal reproduction through seeds.

1 reference

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30 September 2018

Long non-coding RNAs and chromatin regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Unreduced gamete formation in plants: mechanisms and prospects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Male gametogenesis and germline specification in flowering plants

1 reference

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30 September 2018

Dindel: accurate indel calls from short-read data

1 reference

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30 September 2018

Origins, evolution, and phenotypic impact of new genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

siRNAs from miRNA sites mediate DNA methylation of target genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Apomictic and sexual ovules of Boechera display heterochronic global gene expression patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Identification and genetic analysis of the APOSPORY locus in Hypericum perforatum L.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Introgression of apomixis into sexual species is inhibited by mentor effects and ploidy barriers in the Ranunculus auricomus complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Molecular signatures of apomictic and sexual ovules in the Boechera holboellii complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Transcript elongation factor TFIIS is involved in arabidopsis seed dormancy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Non-coding RNA prediction and verification in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Mutations in AtPS1 (Arabidopsis thaliana parallel spindle 1) lead to the production of diploid pollen grains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Comparative transcriptomics of Arabidopsis sperm cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

RNA silencing in plants: yesterday, today, and tomorrow.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Roles of RNA polymerase IV in gene silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Zm401, a short-open reading-frame mRNA or noncoding RNA, is essential for tapetum and microspore development and can regulate the floret formation in maize

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

The Arabidopsis MutS homolog AtMSH5 is required for normal meiosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Rapid flow cytometric analysis of the cell cycle in intact plant tissues.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Diploid apomicts of the Boechera holboellii complex display large-scale chromosome substitutions and aberrant chromosomes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Purifying selection maintains highly conserved noncoding sequences in Drosophila.

1 reference

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30 September 2018

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Small peptide regulators of actin-based cell morphogenesis encoded by a polycistronic mRNA.

1 reference

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30 September 2018

LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons

1 reference

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30 September 2018

Comparative genetic mapping in Boechera stricta, a close relative of Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

BcMF11, a putative pollen-specific non-coding RNA from Brassica campestris ssp. chinensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor

1 reference

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30 September 2018

Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts.

1 reference

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30 September 2018

Comprehensive algorithm for quantitative real-time polymerase chain reaction

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30 September 2018

Transposable elements, gene creation and genome rearrangement in flowering plants

1 reference

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30 September 2018

Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize

1 reference

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30 September 2018

Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3850206

30 September 2018

Clustering and conservation patterns of human microRNAs

1 reference

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30 September 2018

Isolation of candidate genes for apomixis in Poa pratensis L.

1 reference

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30 September 2018

Function of alternative splicing

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30 September 2018

Transcriptome analysis of haploid male gametophyte development in Arabidopsis

1 reference

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30 September 2018

Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs

1 reference

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30 September 2018

SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis

1 reference

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30 September 2018

Pack-MULE transposable elements mediate gene evolution in plants

1 reference

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30 September 2018

Mauve: multiple alignment of conserved genomic sequence with rearrangements

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30 September 2018

Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences

1 reference

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30 September 2018

HOMOLOGY-DEPENDENT GENE SILENCING IN PLANTS.

1 reference

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30 September 2018

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30 September 2018

Sexual and apomictic reproduction in Hieracium subgenus pilosella are closely interrelated developmental pathways.

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30 September 2018

MultiPipMaker and supporting tools: Alignments and analysis of multiple genomic DNA sequences

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30 September 2018

The Arabidopsis MALE MEIOCYTE DEATH1 gene encodes a PHD-finger protein that is required for male meiosis

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30 September 2018

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30 September 2018

Roles for kinesin and myosin during cytokinesis

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30 September 2018

Developmental genetics of gametophytic apomixis.

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30 September 2018

How to avoid sex: the genetic control of gametophytic apomixis.

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30 September 2018

A new mathematical model for relative quantification in real-time RT-PCR

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30 September 2018

Genetic and epigenetic interactions in allopolyploid plants

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30 September 2018

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30 September 2018

Two independent loci control agamospermy (Apomixis) in the triploid flowering plant Erigeron annuus

1 reference

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30 September 2018

Monogenic inheritance of apomixis in two Hieracium species with distinct developmental mechanisms.

1 reference

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30 September 2018

The SPOROCYTELESS gene of Arabidopsis is required for initiation of sporogenesis and encodes a novel nuclear protein.

1 reference

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30 September 2018

mRNAs have greater negative folding free energies than shuffled or codon choice randomized sequences

1 reference

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30 September 2018

Repeats in genomic DNA: mining and meaning

1 reference

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30 September 2018

Tight clustering and hemizygosity of apomixis-linked molecular markers in Pennisetum squamulatum implies genetic control of apospory by a divergent locus that may have no allelic form in sexual genotypes

1 reference

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30 September 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

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30 September 2018

Splicing of precursors to mRNA in higher plants: mechanism, regulation and sub-nuclear organisation of the spliceosomal machinery

1 reference

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30 September 2018

Phosphorylation of elongation factor 1 (EF-1) by protein kinase C stimulates GDP/GTP-exchange activity

1 reference

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30 September 2018

enod40, a gene expressed during nodule organogenesis, codes for a non-translatable RNA involved in plant growth

1 reference

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30 September 2018

Patterns of gene action in plant development revealed by enhancer trap and gene trap transposable elements

1 reference

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30 September 2018

Protein phosphorylation during meiotic maturation of Xenopus oocytes: cdc2 protein kinase targets

1 reference

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30 September 2018

Early flower development in Arabidopsis

1 reference

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30 September 2018

The Male Gametophyte of Flowering Plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

So much "junk" DNA in our genome

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative variation for apomictic reproduction in the genus Boechera (Brassicaceae)

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BcMF11, a novel non-coding RNA gene from Brassica campestris, is required for pollen development and male fertility

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The significance of genic balance to endosperm development in interspecific crosses

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ORYZA SATIVA MYOSIN XI B controls pollen development by photoperiod-sensitive protein localizations

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crosses between sexual and apomictic dandelions (Taraxacum). II. The breakdown of apomixis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cytochemical Analysis of Pollen Development in Wild-Type Arabidopsis and a Male-Sterile Mutant

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An efficient screen for reproductive pathways using mature seeds of monocots and dicots

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Inheritance of apomixis in Poa pratensis confirms a five locus model with differences in gene expressivity and penetrance

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reproductive development in apomictic populations of Arabis holboellii (Brassicaceae)

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Does hybridization drive the transition to asexuality in diploid Boechera?

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A DEFICIENS homologue is down-regulated during apomictic initiation in ovules of Hieracium

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential staining of aborted and nonaborted pollen

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A light microscopic atlas of meiosis in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integrated cytogenetic map of chromosome arm 4S of A. thaliana: structural organization of heterochromatic knob and centromere region

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence that miRNAs are different from other RNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/24130193

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1104/PP.113.222448

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24130193%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

release_bb5kyd3p3jhnvgregskcsaj5je

1 reference

https://api.fatcat.wiki/v0/release/bb5kyd3p3jhnvgregskcsaj5je

24 November 2022

based on heuristic

mapped directly with Wikidata item

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24130193%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

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