(Q42653981)

4 November 2017

title

The genome of BCJA1c: a bacteriophage active against the alkaliphilic bacterium, Bacillus clarkii (English)

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4 November 2017

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Bacillus clarkii

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1

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4 November 2017

Melissa Hayward

2

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4 November 2017

M Dorothy Agnew

series ordinal

3

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4 November 2017

Ken F Jarrell

series ordinal

4

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4 November 2017

publication date

17 November 2004

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4 November 2017

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4 November 2017

volume

9

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4 November 2017

issue

2

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4 November 2017

page(s)

99-109

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Pulling the ribosome out of frame by +1 at a programmed frameshift site by cognate binding of aminoacyl-tRNA.

4 November 2017

cites work

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00792-004-0425-0

Complete genomic sequence of bacteriophage ul36: demonstration of phage heterogeneity within the P335 quasi-species of lactococcal phages.

21 January 2018

1 reference

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Chromosomal insertion sites for phages and plasmids

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The integrase family of tyrosine recombinases: evolution of a conserved active site domain

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Complete genome sequence of an M1 strain of Streptococcus pyogenes

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The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria

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Identification of dinR, a DNA damage-inducible regulator gene of Bacillus subtilis

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The prophages of Lactobacillus johnsonii NCC 533: comparative genomics and transcription analysis

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Remarkable morphological diversity of viruses and virus-like particles in hot terrestrial environments

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Transcriptional regulation of early functions of bacteriophage phi 80

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Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics

1 reference

12 December 2020

1 reference

12 December 2020

Genetic loci of Streptococcus mitis that mediate binding to human platelets

1 reference

12 December 2020

Global phage diversity

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12 December 2020

Terminators of transcription with RNA polymerase from Escherichia coli: what they look like and how to find them.

1 reference

12 December 2020

The dilemma of phage taxonomy illustrated by comparative genomics of Sfi21-like Siphoviridae in lactic acid bacteria

1 reference

12 December 2020

Isolation and characterization of bacteriophage BCJA1, a novel temperate bacteriophage active against the alkaliphilic bacterium, Bacillus clarkii

1 reference

12 December 2020

1 reference

12 December 2020

Phage as agents of lateral gene transfer

1 reference

12 December 2020

Domain architectures of sigma54-dependent transcriptional activators

1 reference

12 December 2020

DNA sequence elements located immediately upstream of the -10 hexamer in Escherichia coli promoters: a systematic study

1 reference

12 December 2020

A computer algorithm for testing potential prokaryotic terminators

1 reference

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DNA asymmetry and the replicational mutational pressure

1 reference

12 December 2020

The complete genomic sequence of lytic bacteriophage gh-1 infecting Pseudomonas putida--evidence for close relationship to the T7 group

1 reference

12 December 2020

The COG database: an updated version includes eukaryotes

1 reference

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Conserved economics of transcription termination in eubacteria

1 reference

12 December 2020

Interaction of Fis protein with DNA: bending and specificity of binding.

1 reference

12 December 2020

PHIRE, a deterministic approach to reveal regulatory elements in bacteriophage genomes

1 reference

12 December 2020

Localized DNA flexibility contributes to target site selection by DNA-bending proteins.

1 reference

12 December 2020

Imbroglios of viral taxonomy: genetic exchange and failings of phenetic approaches

1 reference

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Biochemical and genetic evidence for three transmembrane domains in the class I holin, lambda S.

1 reference

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The fundamental contribution of phages to GAS evolution, genome diversification and strain emergence

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Analyzing genomes with cumulative skew diagrams

1 reference

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CDD: a curated Entrez database of conserved domain alignments

1 reference

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Bacteriophage B103: complete DNA sequence of its genome and relationship to other Bacillus phages

1 reference

12 December 2020

Islander: a database of integrative islands in prokaryotic genomes, the associated integrases and their DNA site specificities

1 reference

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Proteins PblA and PblB of Streptococcus mitis, which promote binding to human platelets, are encoded within a lysogenic bacteriophage.

1 reference

12 December 2020

Bacteriophages: evolution of the majority

1 reference

12 December 2020

Genome organization and molecular analysis of the temperate bacteriophage MM1 of Streptococcus pneumoniae

1 reference

12 December 2020

Holins: form and function in bacteriophage lysis

1 reference

12 December 2020

Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis

1 reference

12 December 2020

Bacteriophage lysis: mechanism and regulation

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12 December 2020

Inactivation and proteolytic cleavage of phage lambda repressor in vitro in an ATP-dependent reaction

1 reference

12 December 2020

Flexible DNA bending in HU-DNA cocrystal structures

1 reference

12 December 2020

P1 plasmid replication: multiple functions of RepA protein at the origin

1 reference

12 December 2020

Terminal-sequence analysis of bacterial ribosomal RNA. Correlation between the 3'-terminal-polypyrimidine sequence of 16-S RNA and translational specificity of the ribosome

1 reference

12 December 2020

Genome sequence of a serotype M3 strain of group A Streptococcus: phage-encoded toxins, the high-virulence phenotype, and clone emergence

1 reference

12 December 2020

Sequence analysis and characterization of phi O1205, a temperate bacteriophage infecting Streptococcus thermophilus CNRZ1205.

1 reference

12 December 2020

Basic local alignment search tool

1 reference

12 December 2020

P1 plasmid replication: replicon structure

1 reference

12 December 2020

Nucleotide sequence of the right early region of Bacillus subtilis phage PZA completes the 19366-bp sequence of PZA genome. Comparison with the homologous sequence of phage phi 29.

1 reference

12 December 2020

The complete genome sequence of the gram-positive bacterium Bacillus subtilis

1 reference

12 December 2020

The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites

1 reference

12 December 2020

Bending and supercoiling of DNA at the attachment site of bacteriophage lambda

1 reference

12 December 2020

Identification and analysis of 'extended -10' promoters in Escherichia coli.

1 reference

12 December 2020

The complete nucleotide sequence and functional organization of Bacillus subtilis bacteriophage SPP1

1 reference

12 December 2020

E. coli recA protein-directed cleavage of phage λ repressor requires polynucleotide

1 reference

12 December 2020

Characterization of a temperate Streptococcus thermophilus bacteriophage and its genetic relationship with lytic phages

1 reference

12 December 2020

Bidirectional replication from an internal ori site of the linear N15 plasmid prophage.

1 reference

12 December 2020

Natrialba magadii virus phiCh1: first complete nucleotide sequence and functional organization of a virus infecting a haloalkaliphilic archaeon

1 reference

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Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis

1 reference

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Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage

1 reference

12 December 2020

The Pfam protein families database

1 reference

12 December 2020

IS222, a new insertion element associated with the genome of Pseudomonas aeruginosa

1 reference

12 December 2020

An ‘integrated model’ of programmed ribosomal frameshifting

1 reference

12 December 2020

Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments

1 reference

12 December 2020

Characterization of a mutation of bacteriophage lambda integrase. Putative role in core binding and strand exchange for a conserved residue.

1 reference

12 December 2020

Mechanism of specific LexA cleavage: autodigestion and the role of RecA coprotease

1 reference

12 December 2020

The PROSITE database, its status in 1999

1 reference

12 December 2020

Evolutionary insights from studies on viruses of hyperthermophilic archaea

1 reference

12 December 2020

Recent improvements to the SMART domain-based sequence annotation resource

1 reference

12 December 2020

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

12 December 2020

Programmed ribosomal frameshifting: much ado about knotting!

1 reference

12 December 2020

SMART: a web-based tool for the study of genetically mobile domains

1 reference

12 December 2020

10.1007/S00792-004-0425-0

Identifiers

DOI

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4 November 2017

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