(Q42732243)

6 November 2017

Structures and Assumptions: Strategies to Harness Gene × Gene and Gene × Environment Interactions in GWAS. (English)

1 reference

genome-wide association study

6 November 2017

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1

Charles Kooperberg

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6 November 2017

3

James Y Dai

1 reference

6 November 2017

Michael Leblanc

2

1 reference

6 November 2017

Indika Rajapakse

series ordinal

4

1 reference

6 November 2017

language of work or name

English

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publication date

1 January 2009

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6 November 2017

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6 November 2017

24

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6 November 2017

4

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6 November 2017

472-488

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maintained by WikiProject

6 November 2017

WikiProject Mathematics

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cites work

SHARE: an adaptive algorithm to select the most informative set of SNPs for candidate genetic association

1 reference

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Rare variants of IFIH1, a gene implicated in antiviral responses, protect against type 1 diabetes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Adaptively weighted association statistics

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Epistasis--the essential role of gene interactions in the structure and evolution of genetic systems

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Semiparametric estimation exploiting covariate independence in two-phase randomized trials

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Increasing the power of identifying gene x gene interactions in genome-wide association studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

A second generation human haplotype map of over 3.1 million SNPs

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Imputation-based analysis of association studies: candidate regions and quantitative traits

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Variants conferring risk of atrial fibrillation on chromosome 4q25.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

A new multipoint method for genome-wide association studies by imputation of genotypes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Most rare missense alleles are deleterious in humans: implications for complex disease and association studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Powerful multilocus tests of genetic association in the presence of gene-gene and gene-environment interactions

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Test for interaction between two unlinked loci

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Two-stage two-locus models in genome-wide association

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Evaluating statistical significance in two-stage genomewide association studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

A testing framework for identifying susceptibility genes in the presence of epistasis

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Evaluating associations of haplotypes with traits

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Multiple Rare Alleles Contribute to Low Plasma Levels of HDL Cholesterol

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Tree-structured supervised learning and the genetics of hypertension

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Linkage disequilibrium mapping via cladistic analysis of single-nucleotide polymorphism haplotypes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Inference on haplotype effects in case-control studies using unphased genotype data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Statistical significance for genomewide studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

CARD15 genetic variation in a Quebec population: prevalence, genotype-phenotype relationship, and haplotype structure

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Trimming, weighting, and grouping SNPs in human case-control association studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

A unified stepwise regression procedure for evaluating the relative effects of polymorphisms within a gene using case/control or family data: application to HLA in type 1 diabetes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Linkage disequilibrium in humans: models and data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Multifactor-dimensionality reduction reveals high-order interactions among estrogen-metabolism genes in sporadic breast cancer

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Are rare variants responsible for susceptibility to complex diseases?

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Transmission/disequilibrium test meets measured haplotype analysis: family-based association analysis guided by evolution of haplotypes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Designing and analysing case-control studies to exploit independence of genotype and exposure

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Exploiting gene-environment independence for analysis of case-control studies: an empirical Bayes-type shrinkage estimator to trade-off between bias and efficiency

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Identification of SNP interactions using logic regression.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Penalized logistic regression for detecting gene interactions.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Genome-wide strategies for detecting multiple loci that influence complex diseases.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2904990

Who's afraid of epistasis?

16 August 2018

1 reference

12 December 2020

Non-hierarchical logistic models and case-only designs for assessing susceptibility in population-based case-control studies

1 reference

12 December 2020

Logic regression for analysis of the association between genetic variation in the renin-angiotensin system and myocardial infarction or stroke

1 reference

12 December 2020

Exploiting gene-environment interaction to detect genetic associations

1 reference

12 December 2020

Limitations of the case-only design for identifying gene-environment interactions

1 reference

12 December 2020

DNA sequencing. A plan to capture human diversity in 1000 genomes

1 reference

12 December 2020

Identifying interacting SNPs using Monte Carlo logic regression

1 reference

12 December 2020

Identifiers

DOI

10.1214/09-STS287

1 reference

6 November 2017

0 references

1 reference

6 November 2017

1 reference