(Q42790547)

7 November 2017

Analysis of gene sets based on the underlying regulatory network (English)

1 reference

7 November 2017

Ali Shojaie

1

1 reference

PMCID

3131840

7 November 2017

George Michailidis

series ordinal

2

1 reference

PMCID

3131840

7 November 2017

language of work or name

1 reference

1 March 2009

1 reference

Journal of Computational Biology

7 November 2017

1 reference

7 November 2017

16

1 reference

7 November 2017

407-426

1 reference

7 November 2017

3

1 reference

Incorporating gene networks into statistical tests for genomic data via a spatially correlated mixture model

7 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

A Markov random field model for network-based analysis of genomic data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Analyzing gene expression data in terms of gene sets: methodological issues

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Calculating the statistical significance of changes in pathway activity from gene expression data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Discovering statistically significant pathways in expression profiling studies

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Significance analysis of functional categories in gene expression studies: a structured permutation approach

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Genome-wide coexpression dynamics: theory and application

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

The genomics of yeast responses to environmental stress and starvation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Integrated genomic and proteomic analyses of a systematically perturbed metabolic network

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Genomic expression programs in the response of yeast cells to environmental changes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Gene ontology: tool for the unification of biology

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

KEGG: kyoto encyclopedia of genes and genomes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Extensions to gene set enrichment.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

Gaining confidence in high-throughput protein interaction networks

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3131840

16 August 2018

Identifiers

DOI

10.1089/CMB.2008.0081

1 reference

7 November 2017

journals/jcb/ShojaieM09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

7 November 2017

1 reference

PMCID

3131840