(Q42831938)

8 November 2017

title

The reaction mechanism of type I phosphomannose isomerases: new information from inhibition and polarizable molecular mechanics studies (English)

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8 November 2017

7

Constance J Jeffery

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8 November 2017

Céline Roux

1

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8 November 2017

Forum Bhatt

2

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8 November 2017

Johanna Foret

3

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8 November 2017

Benoit de Courcy

4

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8 November 2017

Nohad Gresh

5

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8 November 2017

Jean-Philip Piquemal

6

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8 November 2017

Laurent Salmon

8

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8 November 2017

language of work or name

English

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publication date

1 January 2011

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8 November 2017

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8 November 2017

volume

79

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8 November 2017

issue

1

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8 November 2017

page(s)

203-220

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Purification, cDNA cloning and heterologous expression of human phosphomannose isomerase

8 November 2017

cites work

1 reference

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A novel phosphoglucose isomerase (PGI)/phosphomannose isomerase from the crenarchaeon Pyrobaculum aerophilum is a member of the PGI superfamily: structural evidence at 1.16-A resolution

21 January 2018

1 reference

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Structural basis for phosphomannose isomerase activity in phosphoglucose isomerase from Pyrobaculum aerophilum: a subtle difference between distantly related enzymes

21 January 2018

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Phosphomannose isomerase from Saccharomyces cerevisiae contains two inhibitory metal ion binding sites.

21 January 2018

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Excess mannose limits the growth of phosphomannose isomerase PMI40 deletion strain of Saccharomyces cerevisiae

21 January 2018

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Identification of Cys-150 in the active site of phosphomannose isomerase from Candida albicans.

21 January 2018

1 reference

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The x-ray crystal structure of phosphomannose isomerase from Candida albicans at 1.7 angstrom resolution

21 January 2018

1 reference

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Identification of an Fe(III)-dihydroxyphenylalanine site in recombinant phosphomannose isomerase from Candida albicans.

21 January 2018

1 reference

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Nucleotide sequence and transcriptional start point of the phosphomannose isomerase gene (manA) of Escherichia coli

21 January 2018

1 reference

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Structures of mannose-6-phosphate isomerase from Salmonella typhimurium bound to metal atoms and substrate: implications for catalytic mechanism

21 January 2018

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Bifunctional phosphomannose isomerase/GDP-D-mannose pyrophosphorylase is the point of control for GDP-D-mannose biosynthesis in Helicobacter pylori

21 January 2018

1 reference

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Mannose metabolism is required for mycobacterial growth

21 January 2018

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The role of phosphomannose isomerase in Leishmania mexicana glycoconjugate synthesis and virulence

21 January 2018

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A novel Saccharomyces cerevisiae secretory mutant possesses a thermolabile phosphomannose isomerase

21 January 2018

1 reference

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Cloning and heterologous expression of the Candida albicans gene PMI 1 encoding phosphomannose isomerase

21 January 2018

1 reference

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Identification and characterization of the Cryptococcus neoformans phosphomannose isomerase-encoding gene, MAN1, and its impact on pathogenicity

21 January 2018

1 reference

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Hyphal tip extension in Aspergillus nidulans requires the manA gene, which encodes phosphomannose isomerase

21 January 2018

1 reference

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Synthesis and evaluation of non-hydrolyzable D-mannose 6-phosphate surrogates reveal 6-deoxy-6-dicarboxymethyl-D-mannose as a new strong inhibitor of phosphomannose isomerases

21 January 2018

1 reference

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Computational study of human phosphomannose isomerase: Insights from homology modeling and molecular dynamics simulation of enzyme bound substrate

21 January 2018

1 reference

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A metal-mediated hydride shift mechanism for xylose isomerase based on the 1.6 A Streptomyces rubiginosus structures with xylitol and D-xylose

21 January 2018

1 reference

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Isotopic exchange plus substrate and inhibition kinetics of D-xylose isomerase do not support a proton-transfer mechanism

21 January 2018

1 reference

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Role of the divalent metal ion in sugar binding, ring opening, and isomerization by D-xylose isomerase: replacement of a catalytic metal by an amino acid

21 January 2018

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Design, synthesis, and characterization of a potent xylose isomerase inhibitor, D-threonohydroxamic acid, and high-resolution X-ray crystallographic structure of the enzyme-inhibitor complex

21 January 2018

1 reference

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Xylose isomerase in substrate and inhibitor michaelis states: atomic resolution studies of a metal-mediated hydride shift

21 January 2018

1 reference

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The structure of rhamnose isomerase from Escherichia coli and its relation with xylose isomerase illustrates a change between inter and intra-subunit complementation during evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Structure of the triosephosphate isomerase-phosphoglycolohydroxamate complex: an analogue of the intermediate on the reaction pathway

21 January 2018

1 reference

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Configurational and conformational aspects of carbohydrate biochemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Inhibition of type I and type II phosphomannose isomerases by the reaction intermediate analogue 5-phospho-D-arabinonohydroxamic acid supports a catalytic role for the metal cofactor

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Anisotropic, Polarizable Molecular Mechanics Studies of Inter- and Intramolecular Interactions and Ligand-Macromolecule Complexes. A Bottom-Up Strategy

21 January 2018

1 reference

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Binding of D- and L-captopril inhibitors to metallo-beta-lactamase studied by polarizable molecular mechanics and quantum mechanics

21 January 2018

1 reference

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Complexes of thiomandelate and captopril mercaptocarboxylate inhibitors to metallo-beta-lactamase by polarizable molecular mechanics. Validation on model binding sites by quantum chemistry

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Conformation-dependent intermolecular interaction energies of the triphosphate anion with divalent metal cations. Application to the ATP-binding site of a binuclear bacterial enzyme. A parallel quantum chemical and polarizable molecular mechanics in

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Representation of Zn(II) complexes in polarizable molecular mechanics. Further refinements of the electrostatic and short-range contributions. Comparisons with parallel ab initio computations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Understanding selectivity of hard and soft metal cations within biological systems using the subvalence concept. I. Application to blood coagulation: direct cation-protein electronic effects vs. indirect interactions through water networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Polarizable water molecules in ligand-macromolecule recognition. Impact on the relative affinities of competing pyrrolopyrimidine inhibitors for FAK kinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

A convenient preparation of aldonohydroxamic acids in water and crystal structure of L-erythronohydroxamic acid

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

NPS@: network protein sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

ESPript/ENDscript: Extracting and rendering sequence and 3D information from atomic structures of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Crystal structure of rabbit phosphoglucose isomerase complexed with its substrate D-fructose 6-phosphate

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

The crystal structure of mouse phosphoglucose isomerase at 1.6A resolution and its complex with glucose 6-phosphate reveals the catalytic mechanism of sugar ring opening

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

The crystal structure of rabbit phosphoglucose isomerase complexed with D-sorbitol-6-phosphate, an analog of the open chain form of D-glucose-6-phosphate

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Competitive inhibitors of Mycobacterium tuberculosis ribose-5-phosphate isomerase B reveal new information about the reaction mechanism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Derivation of force fields for molecular mechanics and dynamics from ab initio energy surfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Very fast empirical prediction and rationalization of protein pKa values

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Very fast prediction and rationalization of pKa values for protein-ligand complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Purification and characterization of fungal and mammalian phosphomannose isomerases

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

Arginine 304 Is an Active Site Residue in Phosphomannose Isomerase from Candida albicans

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22873

21 January 2018

Identifiers

DOI

10.1002/PROT.22873

1 reference

8 November 2017

1 reference