(Q42932042)

11 November 2017

Single-nucleotide polymorphism phylotyping of Escherichia coli (English)

1 reference

single-nucleotide polymorphism

11 November 2017

1 reference

1 reference

1

1 reference

11 November 2017

5

Erick Denamur

1 reference

11 November 2017

Sabrina Pereira

2

1 reference

11 November 2017

Cécile Acquaviva

series ordinal

3

1 reference

11 November 2017

Patricia Escobar-Páramo

series ordinal

4

1 reference

11 November 2017

language of work or name

English

0 references

publication date

1 August 2005

1 reference

Applied and Environmental Microbiology

11 November 2017

1 reference

11 November 2017

71

1 reference

11 November 2017

8

1 reference

11 November 2017

4784-4792

1 reference

Phylogeny and strain typing of Escherichia coli, inferred from variation at mononucleotide repeat loci

11 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

The distribution and genetic structure of Escherichia coli in Australian vertebrates: host and geographic effects

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Multi-locus sequence typing: a tool for global epidemiology

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Automated ribotyping provides rapid phylogenetic subgroup affiliation of clinical extraintestinal pathogenic Escherichia coli strains

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Single nucleotide polymorphisms and the future of genetic epidemiology

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Rapid and simple determination of the Escherichia coli phylogenetic group

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Predictive fluorescent amplified-fragment length polymorphism analysis of Escherichia coli: high-resolution typing method with phylogenetic significance

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

The link between phylogeny and virulence in Escherichia coli extraintestinal infection

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Escherichia coli molecular phylogeny using the incongruence length difference test

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Single nucleotide polymorphism hunting in cyberspace

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Chromosomal regions specific to pathogenic isolates of Escherichia coli have a phylogenetically clustered distribution.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

The complete genome sequence of Escherichia coli K-12

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Standard reference strains of Escherichia coli from natural populations

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Molecular and evolutionary relationships among enteric bacteria

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Decreasing the effects of horizontal gene transfer on bacterial phylogeny: the Escherichia coli case study.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

A UK multicentre study of the antimicrobial susceptibility of bacterial pathogens causing urinary tract infection

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Evolutionary implications of the frequent horizontal transfer of mismatch repair genes.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Phylogenetic distribution of extraintestinal virulence-associated traits in Escherichia coli

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Parallel evolution of virulence in pathogenic Escherichia coli.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1183324

Sex in Escherichia coli does not disrupt the clonal structure of the population: evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism

16 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16085876

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Phylogenetic analysis of Escherichia coli strains causing neonatal meningitis suggests horizontal gene transfer from a predominant pool of highly virulent B2 group strains

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16085876

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.71.8.4784-4792.2005

1 reference

11 November 2017

1 reference

11 November 2017

PubMed publication ID

16085876

1 reference