(Q43005281)

English

Reconstruction of large-scale regulatory networks based on perturbation graphs and transitive reduction: improved methods and their evaluation.

scientific article published on 8 August 2013

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23924435%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Reconstruction of large-scale regulatory networks based on perturbation graphs and transitive reduction: improved methods and their evaluation (English)

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23924435%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

5

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23924435%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Robert J Flassig

3

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23924435%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

author name string

Andrea Pinna

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23924435%20AND%20SRC:MED&resulttype=core&format=json

7 March 2020

Sandra Heise

2

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7 March 2020

Alberto de la Fuente

4

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7 March 2020

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8 August 2013

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7 March 2020

BMC Systems Biology

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7 March 2020

7

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7 March 2020

73

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7 March 2020

An effective framework for reconstructing gene regulatory networks from genetical genomics data

1 reference

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26 May 2018

Efficient reconstruction of biological networks via transitive reduction on general purpose graphics processors.

1 reference

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26 May 2018

Wisdom of crowds for robust gene network inference

1 reference

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26 May 2018

A relative variation-based method to unraveling gene regulatory networks

1 reference

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26 May 2018

Verification of systems biology research in the age of collaborative competition

1 reference

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Simulating systems genetics data with SysGenSIM

1 reference

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GeneNetWeaver: in silico benchmark generation and performance profiling of network inference methods

1 reference

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26 May 2018

Mouse library set to be knockout

1 reference

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26 May 2018

From knockouts to networks: establishing direct cause-effect relationships through graph analysis.

1 reference

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26 May 2018

Inferring regulatory networks from expression data using tree-based methods

1 reference

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26 May 2018

Advantages and limitations of current network inference methods

1 reference

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26 May 2018

TRANSWESD: inferring cellular networks with transitive reduction.

1 reference

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Comprehensive reanalysis of transcription factor knockout expression data in Saccharomyces cerevisiae reveals many new targets

1 reference

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Revealing strengths and weaknesses of methods for gene network inference

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Towards a rigorous assessment of systems biology models: the DREAM3 challenges

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Discrete logic modelling as a means to link protein signalling networks with functional analysis of mammalian signal transduction

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Computing paths and cycles in biological interaction graphs

1 reference

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26 May 2018

Inference of regulatory gene interactions from expression data using three-way mutual information

1 reference

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The DNA-encoded nucleosome organization of a eukaryotic genome

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Models from experiments: combinatorial drug perturbations of cancer cells

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Automatic reconstruction of molecular and genetic networks from discrete time series data

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Estimating the size of the human interactome

1 reference

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26 May 2018

Current approaches to gene regulatory network modelling

1 reference

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26 May 2018

Inferring cellular networks--a review

1 reference

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26 May 2018

Comparing association network algorithms for reverse engineering of large-scale gene regulatory networks: synthetic versus real data

1 reference

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26 May 2018

Genetic reconstruction of a functional transcriptional regulatory network

1 reference

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26 May 2018

How to infer gene networks from expression profiles

1 reference

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26 May 2018

ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context

1 reference

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26 May 2018

Bioconductor: open software development for computational biology and bioinformatics

1 reference

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26 May 2018

Genomic analysis of regulatory network dynamics reveals large topological changes

1 reference

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Discovery of meaningful associations in genomic data using partial correlation coefficients

1 reference

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1 reference

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Untangling the wires: a strategy to trace functional interactions in signaling and gene networks

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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12 December 2020

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7 March 2020

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