(Q43026264)

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Quantitative detection of culturable methanogenic archaea abundance in anaerobic treatment systems using the sequence-specific rRNA cleavage method

scientific article published on 12 February 2009

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scholarly article

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Europe PubMed Central

PubMed publication ID

12 November 2017

Quantitative detection of culturable methanogenic archaea abundance in anaerobic treatment systems using the sequence-specific rRNA cleavage method (English)

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Europe PubMed Central

PubMed publication ID

12 November 2017

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Takashi Narihiro

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Takashi Narihiro

1

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Yuji Sekiguchi

9

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Wen-Tso Liu

5

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author name string

Takeshi Terada

2

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Europe PubMed Central

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12 November 2017

Akiko Ohashi

3

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Europe PubMed Central

PubMed publication ID

12 November 2017

Jer-Horng Wu

4

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Europe PubMed Central

PubMed publication ID

12 November 2017

Nobuo Araki

6

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Europe PubMed Central

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12 November 2017

Yoichi Kamagata

7

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Europe PubMed Central

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12 November 2017

Kazunori Nakamura

8

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Europe PubMed Central

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12 November 2017

publication date

12 February 2009

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Europe PubMed Central

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12 November 2017

The ISME Journal

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Europe PubMed Central

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12 November 2017

3

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Europe PubMed Central

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12 November 2017

5

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Europe PubMed Central

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12 November 2017

522-535

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Europe PubMed Central

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12 November 2017

Functional bacterial and archaeal community structures of major trophic groups in a full-scale anaerobic sludge digester

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Investigation of the methanogen population structure and activity in a brackish lake sediment.

1 reference

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Isolation of a novel acidiphilic methanogen from an acidic peat bog.

1 reference

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Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli

1 reference

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Identification of important microbial populations in the mesophilic and thermophilic phenol-degrading methanogenic consortia.

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Distribution, localization, and phylogeny of abundant populations of Crenarchaeota in anaerobic granular sludge

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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An update and optimisation of oligonucleotide probes targeting methanogenic Archaea for use in fluorescence in situ hybridisation (FISH).

1 reference

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The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

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Confidence Limits on Phylogenies: an Approach using the Bootstrap

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Syntrophic acetate-oxidizing microbes in methanogenic environments

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Dynamic transition of a methanogenic population in response to the concentration of volatile fatty acids in a thermophilic anaerobic digester.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Methanolinea tarda gen. nov., sp. nov., a methane-producing archaeon isolated from a methanogenic digester sludge

1 reference

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21 January 2018

Cultivation and in situ detection of a thermophilic bacterium capable of oxidizing propionate in syntrophic association with hydrogenotrophic methanogens in a thermophilic methanogenic granular sludge

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

ARB: a software environment for sequence data

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Methanosaeta harundinacea sp. nov., a novel acetate-scavenging methanogen isolated from a UASB reactor

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Methanogenic population structure in a variety of anaerobic bioreactors

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Microbial population dynamics during start-up and overload conditions of anaerobic digesters treating municipal solid waste and sewage sludge

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Nitrogen fixation at 92 degrees C by a hydrothermal vent archaeon

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Application of pseudomurein endoisopeptidase to fluorescence in situ hybridization of methanogens within the family Methanobacteriaceae

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Endosymbiotic Bacteroidales bacteria of the flagellated protist Pseudotrichonympha grassii in the gut of the termite Coptotermes formosanus

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21 January 2018

Subseafloor microbial communities in methane hydrate-bearing sediment at two distinct locations (ODP Leg204) in the cascadia margin

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Isolation of key methanogens for global methane emission from rice paddy fields: a novel isolate affiliated with the clone cluster rice cluster I

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Sequence-specific cleavage of small-subunit (SSU) rRNA with oligonucleotides and RNase H: a rapid and simple approach to SSU rRNA-based quantitative detection of microorganisms

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Evaluation of group-specific, 16S rRNA-targeted scissor probes for quantitative detection of predominant bacterial populations in dairy cattle rumen

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21 January 2018

Impact of consumption of probiotic lactobacilli-containing yogurt on microbial composition in human feces.

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21 January 2018

Diversity, localization, and physiological properties of filamentous microbes belonging to Chloroflexi subphylum I in mesophilic and thermophilic methanogenic sludge granules

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Characterization of filamentous bacteria, belonging to candidate phylum KSB3, that are associated with bulking in methanogenic granular sludges

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Phylogenetic analysis of methanogens in sheep rumen ecosystem and detection of Methanomicrobium mobile By fluorescence in situ hybridization

1 reference

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21 January 2018

Use of real-time PCR for group-specific quantification of aceticlastic methanogens in anaerobic processes: population dynamics and community structures

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21 January 2018

Monitoring granule formation in anaerobic upflow bioreactors using oligonucleotide hybridization probes

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21 January 2018

Phylogenetic Relationship of Symbiotic Archaea in the Gut of the Higher Termite Nasutitermes takasagoensis Fed with Various Carbon Sources

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

Taxonomic Outline of the Bacteria and Archaea

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

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Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

Phylogenetic diversity of mesophilic and thermophilic granular sludges determined by 16S rRNA gene analysis.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

Sequence-specific cleavage of 16S rRNA for rapid and quantitative detection of particular groups of anaerobes in bioreactors.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

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inferred from DOI database lookup

Whole-cell hybridization of Methanosarcina cells with two new oligonucleotide probes.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

16S ribosomal DNA amplification for phylogenetic study

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1038/ISMEJ.2009.4

1 reference

Europe PubMed Central

PubMed publication ID

12 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

12 November 2017

ResearchGate publication ID

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