(Q43026264)

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Quantitative detection of culturable methanogenic archaea abundance in anaerobic treatment systems using the sequence-specific rRNA cleavage method

scientific article published on 12 February 2009

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scholarly article

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Europe PubMed Central

PubMed publication ID

12 November 2017

Quantitative detection of culturable methanogenic archaea abundance in anaerobic treatment systems using the sequence-specific rRNA cleavage method (English)

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Europe PubMed Central

PubMed publication ID

12 November 2017

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Takashi Narihiro

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Takashi Narihiro

1

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Yuji Sekiguchi

9

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Wen-Tso Liu

5

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author name string

Takeshi Terada

2

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Europe PubMed Central

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12 November 2017

Akiko Ohashi

3

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Europe PubMed Central

PubMed publication ID

12 November 2017

Jer-Horng Wu

4

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Europe PubMed Central

PubMed publication ID

12 November 2017

Nobuo Araki

6

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Europe PubMed Central

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12 November 2017

Yoichi Kamagata

7

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Europe PubMed Central

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12 November 2017

Kazunori Nakamura

8

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Europe PubMed Central

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12 November 2017

publication date

12 February 2009

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Europe PubMed Central

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12 November 2017

The ISME Journal

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Europe PubMed Central

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12 November 2017

3

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Europe PubMed Central

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12 November 2017

5

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Europe PubMed Central

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12 November 2017

522-535

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Europe PubMed Central

PubMed publication ID

12 November 2017

https://scigraph.springernature.com/pub.10.1038/ismej.2009.4

0 references

Functional bacterial and archaeal community structures of major trophic groups in a full-scale anaerobic sludge digester

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Investigation of the methanogen population structure and activity in a brackish lake sediment.

1 reference

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Isolation of a novel acidiphilic methanogen from an acidic peat bog.

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Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli

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Identification of important microbial populations in the mesophilic and thermophilic phenol-degrading methanogenic consortia.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Novel predominant archaeal and bacterial groups revealed by molecular analysis of an anaerobic sludge digester

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Distribution, localization, and phylogeny of abundant populations of Crenarchaeota in anaerobic granular sludge

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

An update and optimisation of oligonucleotide probes targeting methanogenic Archaea for use in fluorescence in situ hybridisation (FISH).

1 reference

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The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

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Confidence Limits on Phylogenies: an Approach using the Bootstrap

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Syntrophic acetate-oxidizing microbes in methanogenic environments

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Dynamic transition of a methanogenic population in response to the concentration of volatile fatty acids in a thermophilic anaerobic digester.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Methanolinea tarda gen. nov., sp. nov., a methane-producing archaeon isolated from a methanogenic digester sludge

1 reference

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21 January 2018

Cultivation and in situ detection of a thermophilic bacterium capable of oxidizing propionate in syntrophic association with hydrogenotrophic methanogens in a thermophilic methanogenic granular sludge

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

ARB: a software environment for sequence data

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Methanosaeta harundinacea sp. nov., a novel acetate-scavenging methanogen isolated from a UASB reactor

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Methanogenic population structure in a variety of anaerobic bioreactors

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Microbial population dynamics during start-up and overload conditions of anaerobic digesters treating municipal solid waste and sewage sludge

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

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Nitrogen fixation at 92 degrees C by a hydrothermal vent archaeon

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Application of pseudomurein endoisopeptidase to fluorescence in situ hybridization of methanogens within the family Methanobacteriaceae

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21 January 2018

Endosymbiotic Bacteroidales bacteria of the flagellated protist Pseudotrichonympha grassii in the gut of the termite Coptotermes formosanus

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21 January 2018

Subseafloor microbial communities in methane hydrate-bearing sediment at two distinct locations (ODP Leg204) in the cascadia margin

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21 January 2018

Isolation of key methanogens for global methane emission from rice paddy fields: a novel isolate affiliated with the clone cluster rice cluster I

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Sequence-specific cleavage of small-subunit (SSU) rRNA with oligonucleotides and RNase H: a rapid and simple approach to SSU rRNA-based quantitative detection of microorganisms

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Evaluation of group-specific, 16S rRNA-targeted scissor probes for quantitative detection of predominant bacterial populations in dairy cattle rumen

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21 January 2018

Impact of consumption of probiotic lactobacilli-containing yogurt on microbial composition in human feces.

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Diversity, localization, and physiological properties of filamentous microbes belonging to Chloroflexi subphylum I in mesophilic and thermophilic methanogenic sludge granules

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Characterization of filamentous bacteria, belonging to candidate phylum KSB3, that are associated with bulking in methanogenic granular sludges

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Phylogenetic analysis of methanogens in sheep rumen ecosystem and detection of Methanomicrobium mobile By fluorescence in situ hybridization

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

21 January 2018

Use of real-time PCR for group-specific quantification of aceticlastic methanogens in anaerobic processes: population dynamics and community structures

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21 January 2018

Monitoring granule formation in anaerobic upflow bioreactors using oligonucleotide hybridization probes

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21 January 2018

Phylogenetic Relationship of Symbiotic Archaea in the Gut of the Higher Termite Nasutitermes takasagoensis Fed with Various Carbon Sources

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21 January 2018

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

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Taxonomic Outline of the Bacteria and Archaea

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

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Diversity and structure of the methanogenic community in anoxic rice paddy soil microcosms as examined by cultivation and direct 16S rRNA gene sequence retrieval.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

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Quantification of methanogenic groups in anaerobic biological reactors by oligonucleotide probe hybridization

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

Phylogenetic diversity of mesophilic and thermophilic granular sludges determined by 16S rRNA gene analysis.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

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Sequence-specific cleavage of 16S rRNA for rapid and quantitative detection of particular groups of anaerobes in bioreactors.

1 reference

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7 January 2021

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Whole-cell hybridization of Methanosarcina cells with two new oligonucleotide probes.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

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16S ribosomal DNA amplification for phylogenetic study

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.4

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1038/ISMEJ.2009.4

1 reference

Europe PubMed Central

PubMed publication ID

12 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

12 November 2017

ResearchGate publication ID

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