(Q43034995)

12 November 2017

title

Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content (English)

1 reference

12 November 2017

1 reference

1 reference

https://api.crossref.org/works/10.1016/S0378-1119(03)00660-7

29 March 2024

author name string

Gregory A. C. Singer

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14604790

29 March 2024

Donal A. Hickey

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A14604790

29 March 2024

language of work or name

English

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publication date

1 October 2003

1 reference

12 November 2017

23 October 2003

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=14604790

full work available at URL

29 March 2024

https://api.elsevier.com/content/article/PII:S0378111903006607?httpAccept=text/xml

1 reference

https://api.crossref.org/works/10.1016/S0378-1119(03)00660-7

https://api.elsevier.com/content/article/PII:S0378111903006607?httpAccept=text/plain

29 March 2024

1 reference

https://api.crossref.org/works/10.1016/S0378-1119(03)00660-7

29 March 2024

1 reference

12 November 2017

volume

317

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12 November 2017

issue

1-2

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12 November 2017

page(s)

39-47

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RNA tertiary structure mediation by adenosine platforms

12 November 2017

cites work

1 reference

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7 January 2021

Inferring genome trees by using a filter to eliminate phylogenetically discordant sequences and a distance matrix based on mean normalized BLASTP scores

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7 January 2021

Structural basis for thermophilic protein stability: structures of thermophilic and mesophilic malate dehydrogenases

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7 January 2021

The complete genome of the hyperthermophilic bacterium Aquifex aeolicus

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7 January 2021

Genome sequence of Yersinia pestis KIM

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7 January 2021

Species-specific protein sequence and fold optimizations

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7 January 2021

Phylogenies and the Comparative Method

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7 January 2021

The use of multiple measurements in taxonomic problems

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7 January 2021

Asymmetric substitution patterns: a review of possible underlying mutational or selective mechanisms

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7 January 2021

Codon usage in bacteria: correlation with gene expressivity

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https://api.crossref.org/works/10.1016%2FS0378-1119%2803%2900660-7

7 January 2021

Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type.

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7 January 2021

Synonymous codon usage in Pseudomonas aeruginosa PA01.

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7 January 2021

Important inter-residue contacts for enhancing the thermal stability of thermophilic proteins

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7 January 2021

Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species

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7 January 2021

R: A Language for Data Analysis and Graphics

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7 January 2021

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

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7 January 2021

Thermostability of proteins from Thermotoga maritima

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7 January 2021

Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome

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7 January 2021

Identification of thermophilic species by the amino acid compositions deduced from their genomes

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7 January 2021

Thermophilic bacteria strictly obey Szybalski's transcription direction rule and politely purine-load RNAs with both adenine and guanine

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7 January 2021

Influence of genomic G+C content on average amino-acid composition of proteins from 59 bacterial species

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7 January 2021

Synonymous codon usage is subject to selection in thermophilic bacteria

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7 January 2021

Replicational and transcriptional selection on codon usage in Borrelia burgdorferi

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7 January 2021

Synonymous codon usage in Bacillus subtilis reflects both translational selection and mutational biases

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7 January 2021

Nucleotide bias causes a genomewide bias in the amino acid composition of proteins.

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7 January 2021

Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases

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7 January 2021

DNA G+C content of the third codon position and codon usage biases of human genes.

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7 January 2021

Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis

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7 January 2021

Bivalent cations and amino-acid composition contribute to the thermostability of Bacillus licheniformis xylose isomerase

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7 January 2021

Evidence for strong selective constraint acting on the nucleotide composition of 16S ribosomal RNA genes

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7 January 2021

Trends in codon and amino acid usage in Thermotoga maritima

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7 January 2021

The selection-mutation-drift theory of synonymous codon usage

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A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes

29 March 2024

22

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https://api.crossref.org/works/10.1016/S0378-1119(03)00660-7

29 March 2024

Identifiers

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12 November 2017

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