(Q43089295)

13 November 2017

Characterizing the protonation state of cytosine in transient G·C Hoogsteen base pairs in duplex DNA. (English)

1 reference

13 November 2017

0 references

3

Charles L Brooks

1 reference

13 November 2017

Evgenia N Nikolova

1

1 reference

13 November 2017

Garrett B Goh

series ordinal

2

1 reference

13 November 2017

Hashim M Al-Hashimi

series ordinal

4

1 reference

13 November 2017

language of work or name

English

0 references

publication date

29 April 2013

1 reference

Journal of the American Chemical Society

13 November 2017

1 reference

13 November 2017

135

1 reference

13 November 2017

18

1 reference

13 November 2017

6766-6769

1 reference

pH-dependent dynamics of complex RNA macromolecules

13 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Thermodynamic coupling of protonation and conformational equilibria in proteins: theory and simulation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Constant pH Molecular Dynamics Simulations of Nucleic Acids in Explicit Solvent

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Solution structure of a minor and transiently formed state of a T4 lysozyme mutant

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Transient Hoogsteen base pairs in canonical duplex DNA.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Driving forces for nucleic acid pK(a) shifting in an A(+).C wobble: effects of helix position, temperature, and ionic strength

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Characterization of the dynamics of biomacromolecules using rotating-frame spin relaxation NMR spectroscopy

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Off-resonance R(1rho) NMR studies of exchange dynamics in proteins with low spin-lock fields: an application to a Fyn SH3 domain

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

TATA element recognition by the TATA box-binding protein has been conserved throughout evolution

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

The role of the AT pairs in the acid denaturation of DNA

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Probing transient Hoogsteen hydrogen bonds in canonical duplex DNA using NMR relaxation dispersion and single-atom substitution

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Human DNA polymerase iota incorporates dCTP opposite template G via a G.C + Hoogsteen base pair

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

DNA polymerases: Hoogsteen base-pairing in DNA replication?

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Simple method for determining nucleobase pK(a) values by indirect labeling and demonstration of a pK(a) of neutrality in dsDNA.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Replication by human DNA polymerase-iota occurs by Hoogsteen base-pairing

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3713198

Sites and thermodynamic quantities associated with proton and metal ion interaction with ribonucleic acid, deoxyribonucleic acid, and their constituent bases, nucleosides, and and nucleotides

15 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23506098

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The molecular structure of a DNA-triostin A complex

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23506098

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The contribution of cytosine protonation to the stability of parallel DNA triple helices

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23506098

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/JA400994E

1 reference

13 November 2017

1 reference

13 November 2017

PubMed publication ID

23506098

1 reference