(Q43101354)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26700852%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

title

Hierarchical folding and reorganization of chromosomes are linked to transcriptional changes in cellular differentiation (English)

1 reference

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3 March 2020

8

1 reference

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3 March 2020

Hideya Kawaji

14

1 reference

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3 March 2020

Ana Pombo

22

1 reference

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3 March 2020

Carmelo Ferrai

2

1 reference

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3 March 2020

Andrea M Chiariello

3

1 reference

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3 March 2020

Giovanni Laudanno

6

1 reference

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3 March 2020

Piero Carninci

17

1 reference

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3 March 2020

Alistair Forrest

18

1 reference

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3 March 2020

Mario Nicodemi

23

1 reference

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3 March 2020

Yoshihide Hayashizaki

16

object named as

Yoshihide Hayashizaki

1 reference

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3 March 2020

author name string

James Fraser

1

1 reference

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3 March 2020

Markus Schueler

4

1 reference

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3 March 2020

Tiago Rito

5

1 reference

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3 March 2020

Mariano Barbieri

7

1 reference

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3 March 2020

Dorothee C A Kraemer

9

1 reference

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3 March 2020

Stuart Aitken

10

1 reference

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3 March 2020

Sheila Q Xie

11

1 reference

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3 March 2020

Kelly J Morris

12

1 reference

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3 March 2020

Masayoshi Itoh

13

1 reference

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3 March 2020

Ines Jaeger

15

1 reference

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3 March 2020

FANTOM Consortium

19

1 reference

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3 March 2020

Colin A Semple

20

1 reference

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3 March 2020

Josée Dostie

21

1 reference

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3 March 2020

publication date

23 December 2015

1 reference

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Molecular Systems Biology

3 March 2020

published in

1 reference

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3 March 2020

volume

11

1 reference

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3 March 2020

issue

12

1 reference

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3 March 2020

page(s)

852

1 reference

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Integrative modeling reveals the principles of multi-scale chromatin boundary formation in human nuclear organization

3 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Chromatin architecture reorganization during stem cell differentiation.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Topologically associating domains are stable units of replication-timing regulation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Models of chromosome structure

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

A promoter-level mammalian expression atlas

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Polycomb-dependent H3K27me1 and H3K27me2 regulate active transcription and enhancer fidelity

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Architectural protein subclasses shape 3D organization of genomes during lineage commitment

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Structural variations, the regulatory landscape of the genome and their alteration in human disease

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Genome architecture: domain organization of interphase chromosomes

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Chromosomal domains: epigenetic contexts and functional implications of genomic compartmentalization

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Complexity of chromatin folding is captured by the strings and binders switch model

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Spatial partitioning of the regulatory landscape of the X-inactivation centre

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Topological domains in mammalian genomes identified by analysis of chromatin interactions

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

5' end-centered expression profiling using cap-analysis gene expression and next-generation sequencing

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Polycomb associates genome-wide with a specific RNA polymerase II variant, and regulates metabolic genes in ESCs

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Three-dimensional folding and functional organization principles of the Drosophila genome

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Temporally controlled modulation of FGF/ERK signaling directs midbrain dopaminergic neural progenitor fate in mouse and human pluripotent stem cells

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

A user's guide to the encyclopedia of DNA elements (ENCODE)

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Chromatin conformation signatures: ideal human disease biomarkers?

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Neural differentiation of embryonic stem cells in vitro: a road map to neurogenesis in the embryo

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Thermodynamic pathways to genome spatial organization in the cell nucleus

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Global reorganization of replication domains during embryonic stem cell differentiation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Integration of external signaling pathways with the core transcriptional network in embryonic stem cells

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Beyond the sequence: cellular organization of genome function

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Genomic analysis of the hierarchical structure of regulatory networks

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

CAGE: cap analysis of gene expression

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

Hierarchical organization of modularity in metabolic networks

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4704492

25 May 2018

Identifiers

DOI

10.15252/MSB.20156492

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26700852%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26700852%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

PubMed publication ID

26700852

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26700852%20AND%20SRC:MED&resulttype=core&format=json