(Q43111559)

14 November 2017

Reaction coordinates for the flipping of genetic switches (English)

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14 November 2017

3

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14 November 2017

Marco J Morelli

1

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author name string

Sorin Tanase-Nicola

series ordinal

2

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14 November 2017

Pieter Rein ten Wolde

series ordinal

4

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14 November 2017

language of work or name

English

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publication date

25 January 2008

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14 November 2017

11

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inferred from page(s)

published in

Biophysical Journal

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14 November 2017

94

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14 November 2017

9

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14 November 2017

3413-3423

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Absolute rate theories of epigenetic stability

14 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Nonlinear protein degradation and the function of genetic circuits

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Enhancement of cellular memory by reducing stochastic transitions

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Noisy signal amplification in ultrasensitive signal transduction

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Transition path sampling: throwing ropes over rough mountain passes, in the dark.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Stochasticity in transcriptional regulation: origins, consequences, and mathematical representations

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

The importance of being discrete: life always wins on the surface

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Reaction coordinates of biomolecular isomerization

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Construction of a genetic toggle switch in Escherichia coli

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Stochastic simulations of genetic switch systems.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Signal detection, modularity, and the correlation between extrinsic and intrinsic noise in biochemical networks.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Simulating rare events in equilibrium or nonequilibrium stochastic systems.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Robustness, stability and efficiency of phage lambda genetic switch: dynamical structure analysis.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Rate constants for diffusive processes by partial path sampling.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Computing time scales from reaction coordinates by milestoning.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Multistability in the lactose utilization network of Escherichia coli

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Transitions induced by the discreteness of molecules in a small autocatalytic system.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

How to make a biological switch

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Forward flux sampling-type schemes for simulating rare events: Efficiency analysis

1 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2292366

Stability puzzles in phage lambda

1 December 2018

1 reference

12 December 2020

Genetic toggle switch without cooperative binding

1 reference

12 December 2020

Chemical models of genetic toggle switches

1 reference

12 December 2020

Enhancement of the stability of genetic switches by overlapping upstream regulatory domains

1 reference

12 December 2020

Sampling Rare Switching Events in Biochemical Networks

1 reference

12 December 2020

10.1529/BIOPHYSJ.107.116699

Identifiers

DOI

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14 November 2017

1 reference

1 reference

14 November 2017

PubMed publication ID

18222998

1 reference