(Q43122489)

14 November 2017

PRODORIC (release 2009): a database and tool platform for the analysis of gene regulation in prokaryotes (English)

1 reference

14 November 2017

0 references

6

1 reference

14 November 2017

1

Andreas Grote

1 reference

14 November 2017

Johannes Klein

2

1 reference

14 November 2017

Ida Retter

3

1 reference

14 November 2017

Isam Haddad

4

1 reference

14 November 2017

Susanne Behling

5

1 reference

14 November 2017

Ilona Biegler

7

1 reference

14 November 2017

Svitlana Yarmolinetz

8

1 reference

14 November 2017

Dieter Jahn

9

1 reference

14 November 2017

Richard Münch

10

1 reference

14 November 2017

language of work or name

English

0 references

publication date

30 October 2008

1 reference

14 November 2017

Nucleic Acids Research

1 reference

14 November 2017

37

1 reference

14 November 2017

Database issue

1 reference

14 November 2017

D61-5

1 reference

ProdoNet: identification and visualization of prokaryotic gene regulatory and metabolic networks

14 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

SYSTOMONAS--an integrated database for systems biology analysis of Pseudomonas

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

RegTransBase--a database of regulatory sequences and interactions in a wide range of prokaryotic genomes

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

SwissRegulon: a database of genome-wide annotations of regulatory sites

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

What are DNA sequence motifs?

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

Regulog analysis: detection of conserved regulatory networks across bacteria: application to Staphylococcus aureus

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

WebLogo: A Sequence Logo Generator

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

PRODORIC: prokaryotic database of gene regulation.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

Network motifs in the transcriptional regulation network of Escherichia coli

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

A comprehensive library of DNA-binding site matrices for 55 proteins applied to the complete Escherichia coli K-12 genome

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

ROSY--a flexible and universal database and bioinformatics tool platform for Roseobacter related species.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

Evolvability and hierarchy in rewired bacterial gene networks

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

Virtual Footprint and PRODORIC: an integrative framework for regulon prediction in prokaryotes.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686542

15 August 2018

Identifiers

DOI

10.1093/NAR/GKN837

1 reference

journals/nar/GroteKRHBBBYJM09

14 November 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

14 November 2017

1 reference