(Q43137971)

14 November 2017

Analysis of variance components reveals the contribution of sample processing to transcript variation (English)

1 reference

14 November 2017

Douwe van der Veen

1

1 reference

14 November 2017

José Miguel Oliveira

series ordinal

2

1 reference

14 November 2017

Willy A M van den Berg

series ordinal

3

1 reference

14 November 2017

Leo H de Graaff

series ordinal

4

1 reference

14 November 2017

language of work or name

English

0 references

publication date

20 February 2009

1 reference

Applied and Environmental Microbiology

14 November 2017

1 reference

14 November 2017

75

1 reference

14 November 2017

8

1 reference

14 November 2017

2414-2422

1 reference

describes a project that uses

14 November 2017

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/2675206

inferred from PubMed Central ID database lookup

cites work

A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Identification of novel universal housekeeping genes by statistical analysis of microarray data

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Microarray validation: factors influencing correlation between oligonucleotide microarrays and real-time PCR.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Standards in gene expression microarray experiments

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Performing quantitative reverse-transcribed polymerase chain reaction experiments.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

An assessment of recently published gene expression data analyses: reporting experimental design and statistical factors

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

'The 39 steps' in gene expression profiling: critical issues and proposed best practices for microarray experiments

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Real-time RT-PCR normalisation; strategies and considerations.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Sample size for detecting differentially expressed genes in microarray experiments.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Standardized determination of real-time PCR efficiency from a single reaction set-up

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Summaries of Affymetrix GeneChip probe level data

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Quantification of mRNA using real-time reverse transcription PCR (RT-PCR): trends and problems.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Design issues for cDNA microarray experiments

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

The autolysis of industrial filamentous fungi

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

A new mathematical model for relative quantification in real-time RT-PCR

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Regulation of the feruloyl esterase (faeA) gene from Aspergillus niger.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Primer3 on the WWW for general users and for biologist programmers

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Cloning and characterisation of the sagA gene of Aspergillus nidulans: a gene which affects sensitivity to DNA-damaging agents

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

The transcriptional activator XlnR regulates both xylanolytic and endoglucanase gene expression in Aspergillus niger.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

beta-Xylosidase activity, encoded by xlnD, is essential for complete hydrolysis of xylan by Aspergillus niger but not for induction of the xylanolytic enzyme spectrum

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

The fission yeast dma1 gene is a component of the spindle assembly checkpoint, required to prevent septum formation and premature exit from mitosis if spindle function is compromised

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Suppression of oxidative damage by Saccharomyces cerevisiae ATX2, which encodes a manganese-trafficking protein that localizes to Golgi-like vesicles

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Localization of growth and secretion of proteins in Aspergillus niger

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

The Aspergillus niger D-xylulose kinase gene is co-expressed with genes encoding arabinan degrading enzymes, and is essential for growth on D-xylose and L-arabinose

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2675206

Characterization of SYBR Gold nucleic acid gel stain: a dye optimized for use with 300-nm ultraviolet transilluminators

15 August 2018

1 reference

12 December 2020

Comparison of mRNA gene expression by RT-PCR and DNA microarray

1 reference

12 December 2020

The genetics of Aspergillus nidulans

1 reference

12 December 2020

CreA modulates the XlnR-induced expression on xylose of Aspergillus niger genes involved in xylan degradation

1 reference

12 December 2020

Sequence, organization and expression of the core histone genes of Aspergillus nidulans

1 reference

12 December 2020

Identifiers

DOI

10.1128/AEM.02270-08

1 reference

14 November 2017

1 reference

14 November 2017

PubMed publication ID

19233957

1 reference