(Q43152252)

14 November 2017

Protein folding, protein collapse, and tanford's transfer model: lessons from single-molecule FRET. (English)

1 reference

14 November 2017

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1

Guy Ziv

1 reference

14 November 2017

Gilad Haran

2

1 reference

PMC publication ID

2663972

14 November 2017

language of work or name

English

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publication date

1 March 2009

1 reference

Journal of the American Chemical Society

14 November 2017

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14 November 2017

131

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14 November 2017

8

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14 November 2017

2942-2947

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Collapse transition in proteins

14 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Effects of denaturants and osmolytes on proteins are accurately predicted by the molecular transfer model

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

On the relationship between thermal stability and catalytic power of enzymes

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Anatomy of energetic changes accompanying urea-induced protein denaturation.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Ultrafast dynamics of protein collapse from single-molecule photon statistics.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

A natively unfolded yeast prion monomer adopts an ensemble of collapsed and rapidly fluctuating structures.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Distinguishing between cooperative and unimodal downhill protein folding

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Coil-globule transition in the denatured state of a small protein

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditions

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Probing structural heterogeneities and fluctuations of nucleic acids and denatured proteins

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Specific collapse followed by slow hydrogen-bond formation of beta-sheet in the folding of single-chain monellin

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

The kinetics of conformational fluctuations in an unfolded protein measured by fluorescence methods

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Studies on the reduction and re-formation of protein disulfide bonds

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Probing the free-energy surface for protein folding with single-molecule fluorescence spectroscopy

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Thermodynamics of protein folding: a statistical mechanical study of a small all-beta protein

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Mutational analysis of the propensity for amyloid formation by a globular protein

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

NOE data demonstrating a compact unfolded state for an SH3 domain under non-denaturing conditions.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Protein denaturation. C. Theoretical models for the mechanism of denaturation

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Solvent denaturation and stabilization of globular proteins

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Chemical denaturants inhibit the onset of dewetting

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Role of backbone-solvent interactions in determining conformational equilibria of intrinsically disordered proteins

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Coulomb forces control the density of the collapsed unfolded state of barstar

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Interactions between hydrophobic and ionic solutes in aqueous guanidinium chloride and urea solutions: lessons for protein denaturation mechanism.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Urea-induced unfolding of the immunity protein Im9 monitored by spFRET.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Molecular basis for phosphorylation-dependent, PEST-mediated protein turnover

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Single-molecule FRET study of denaturant induced unfolding of RNase H.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

The structure of aqueous guanidinium chloride solutions.

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Early collapse is not an obligate step in protein folding

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Kinetics of intramolecular contact formation in a denatured protein

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Molecular dynamics simulations of end-to-end contact formation in hydrocarbon chains in water and aqueous urea solution

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

How do small single-domain proteins fold?

15 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2663972

Chain collapse can occur concomitantly with the rate-limiting step in protein folding

15 August 2018

1 reference

12 December 2020

Folding dynamics of the B1 domain of protein G explored by ultrarapid mixing

1 reference

12 December 2020

Solubility of amino acids in aqueous urea solutions and its implications for the denaturation of proteins by urea

1 reference

12 December 2020

Two-state expansion and collapse of a polypeptide

1 reference

12 December 2020

Selective binding and solvent denaturation

1 reference

12 December 2020

Configurational distribution of denatured phosphoglycerate kinase

1 reference

12 December 2020

Protein folding kinetics: timescales, pathways and energy landscapes in terms of sequence-dependent properties

1 reference

12 December 2020

Fully reduced ribonuclease A does not expand at high denaturant concentration or temperature

1 reference

12 December 2020

Aqueous urea solutions: structure, energetics, and urea aggregation

1 reference

12 December 2020

Identifiers

DOI

10.1021/JA808305U

1 reference

14 November 2017

1 reference

PMC publication ID

2663972

14 November 2017

PubMed publication ID

19239269

1 reference

PMC publication ID

2663972