(Q43236828)

English

Complete transcriptome of the soybean root hair cell, a single-cell model, and its alteration in response to Bradyrhizobium japonicum infection

scientific article published on 20 November 2009

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scholarly article

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Europe PubMed Central

PubMed publication ID

17 November 2017

Complete transcriptome of the soybean root hair cell, a single-cell model, and its alteration in response to Bradyrhizobium japonicum infection (English)

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Europe PubMed Central

PubMed publication ID

17 November 2017

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Bradyrhizobium japonicum

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inferred from title

11

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Gary Stacey

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Europe PubMed Central

PubMed publication ID

17 November 2017

author name string

Marc Libault

1

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Europe PubMed Central

PubMed publication ID

17 November 2017

Andrew Farmer

2

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Europe PubMed Central

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17 November 2017

Laurent Brechenmacher

3

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Europe PubMed Central

PubMed publication ID

17 November 2017

Jenny Drnevich

4

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Europe PubMed Central

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17 November 2017

Raymond J Langley

5

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Europe PubMed Central

PubMed publication ID

17 November 2017

Damla D Bilgin

6

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Europe PubMed Central

PubMed publication ID

17 November 2017

Osman Radwan

7

1 reference

Europe PubMed Central

PubMed publication ID

17 November 2017

David J Neece

8

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Europe PubMed Central

PubMed publication ID

17 November 2017

Steven J Clough

9

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Europe PubMed Central

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17 November 2017

Gregory D May

10

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17 November 2017

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publication date

20 November 2009

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Europe PubMed Central

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17 November 2017

number of pages

12

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Plant Physiology

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PubMed publication ID

17 November 2017

152

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Europe PubMed Central

PubMed publication ID

17 November 2017

2

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Europe PubMed Central

PubMed publication ID

17 November 2017

541-552

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Europe PubMed Central

PubMed publication ID

17 November 2017

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Creative Commons Attribution 4.0 International

25 January 2021

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April 2022 Public Data File from Crossref

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0 references

Management of High-Throughput DNA Sequencing Projects: Alpheus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Genome sequence of the palaeopolyploid soybean

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Large-scale analysis of putative soybean regulatory gene expression identifies a Myb gene involved in soybean nodule development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Dissection of symbiosis and organ development by integrated transcriptome analysis of lotus japonicus mutant and wild-type plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

GRAS proteins form a DNA binding complex to induce gene expression during nodulation signaling in Medicago truncatula.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Gibberellin controls the nodulation signaling pathway in Lotus japonicus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Coordinating nodule morphogenesis with rhizobial infection in legumes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

A gene expression atlas of the model legume Medicago truncatula.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Transcription profiling of soybean nodulation by Bradyrhizobium japonicum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Gene duplication and paleopolyploidy in soybean and the implications for whole genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Positional cloning identifies Lotus japonicus NSP2, a putative transcription factor of the GRAS family, required for NIN and ENOD40 gene expression in nodule initiation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

MtHAP2-1 is a key transcriptional regulator of symbiotic nodule development regulated by microRNA169 in Medicago truncatula

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Lotus japonicus nodulation requires two GRAS domain regulators, one of which is functionally conserved in a non-legume.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Deregulation of a Ca2+/calmodulin-dependent kinase leads to spontaneous nodule development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Nitrogen fixation mutants of Medicago truncatula fail to support plant and bacterial symbiotic gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Transcript analysis of early nodulation events in Medicago truncatula.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Gibberellins are involved in nodulation of Sesbania rostrata

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Stochastic models inspired by hybridization theory for short oligonucleotide arrays.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Nodulation phenotypes of gibberellin and brassinosteroid mutants of pea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Seven Lotus japonicus genes required for transcriptional reprogramming of the root during fungal and bacterial symbiosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

NSP1 of the GRAS protein family is essential for rhizobial Nod factor-induced transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Nodulation signaling in legumes requires NSP2, a member of the GRAS family of transcriptional regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Comparison of the transcript profiles from the root and the nodulating root of the model legume Lotus japonicus by serial analysis of gene expression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Proteomic analysis of soybean root hairs after infection by Bradyrhizobium japonicum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus japonicus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Plastid proteins crucial for symbiotic fungal and bacterial entry into plant roots.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

A dual-genome Symbiosis Chip for coordinate study of signal exchange and development in a prokaryote-host interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Large-scale analysis of gene expression profiles during early stages of root nodule formation in a model legume, Lotus japonicus.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Mining EST databases to resolve evolutionary events in major crop species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Expression profiling in Medicago truncatula identifies more than 750 genes differentially expressed during nodulation, including many potential regulators of the symbiotic program.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Bioconductor: open software development for computational biology and bioinformatics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Analysis of the root nodule-enhanced transcriptome in soybean

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

A receptor kinase gene of the LysM type is involved in legume perception of rhizobial signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

The NFP locus of Medicago truncatula controls an early step of Nod factor signal transduction upstream of a rapid calcium flux and root hair deformation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Identification and characterization of nodulation-signaling pathway 2, a gene of Medicago truncatula involved in Nod actor signaling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

The novel symbiotic phenotype of enhanced-nodulating mutant of Lotus japonicus: astray mutant is an early nodulating mutant with wider nodulation zone.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Novel aspects of symbiotic nitrogen fixation uncovered by transcript profiling with cDNA arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Four genes of Medicago truncatula controlling components of a nod factor transduction pathway.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

A plant regulator controlling development of symbiotic root nodules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Expression of the early nodulin, ENOD40, in soybean roots in response to various lipo-chitin signal molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Control of leghaemoglobin synthesis in snake beans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Transmissible resistance to penicillin G, neomycin, and chloramphenicol in Rhizobium japonicum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

27 August 2018

Medicago truncatula NIN is essential for rhizobial-independent nodule organogenesis induced by autoactive calcium/calmodulin-dependent protein kinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2815892

3 November 2018

Nodulation independent of rhizobia induced by a calcium-activated kinase lacking autoinhibition

1 reference

https://pubmed.ncbi.nlm.nih.gov/19933387

12 December 2020

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10.1104/PP.109.148379

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Europe PubMed Central

PubMed publication ID

17 November 2017

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PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

17 November 2017

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