(Q43475281)

http://europepmc.org/abstract/PMC/6548679

1 July 2019

title

The different interactions of lysine and arginine side chains with lipid membranes (English)

1 reference

http://europepmc.org/abstract/PMC/6548679

1 July 2019

author

Toby W Allen

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Libo Li

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Libo Li

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

author name string

Igor Vorobyov

3

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12 June 2020

language of work or name

English

0 references

publication date

27 September 2013

1 reference

http://europepmc.org/abstract/PMC/6548679

1 July 2019

published in

Journal of Physical Chemistry B

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

volume

117

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

issue

40

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12 June 2020

page(s)

11906-11920

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

The design, synthesis, and evaluation of molecules that enable or enhance cellular uptake: peptoid molecular transporters

12 June 2020

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12 December 2020

Polyarginine enters cells more efficiently than other polycationic homopolymers

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Amino acid preferences of small proteins. Implications for protein stability and evolution

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Anion-mediated transfer of polyarginine across liquid and bilayer membranes

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Membrane binding and translocation of cell-penetrating peptides

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The structure of aqueous guanidinium chloride solutions.

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Direct observation of anion-mediated translocation of fluorescent oligoarginine carriers into and across bulk liquid and anionic bilayer membranes

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A quantitative assessment of models for voltage-dependent gating of ion channels

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Membrane insertion of a potassium-channel voltage sensor

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12 December 2020

Noncovalent binding between guanidinium and anionic groups: focus on biological- and synthetic-based arginine/guanidinium interactions with phosph[on]ate and sulf[on]ate residues

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12 December 2020

Membrane-permeable arginine-rich peptides and the translocation mechanisms

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12 December 2020

Transmembrane helices before, during, and after insertion

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12 December 2020

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Cationic host defense (antimicrobial) peptides

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How does voltage open an ion channel?

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Lipids out of equilibrium: energetics of desorption and pore mediated flip-flop

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Phospholipids and the origin of cationic gating charges in voltage sensors

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Strengths of hydrogen bonds involving phosphorylated amino acid side chains

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On the thermodynamic stability of a charged arginine side chain in a transmembrane helix

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Partitioning of amino acid side chains into lipid bilayers: results from computer simulations and comparison to experiment

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Toward understanding the cationicity of defensins. Arg and Lys versus their noncoded analogs

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Counterion-mediated membrane penetration: cationic cell-penetrating peptides overcome Born energy barrier by ion-pairing with phospholipids.

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Lonely arginine seeks friendly environment

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Position-resolved free energy of solvation for amino acids in lipid membranes from molecular dynamics simulations.

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12 December 2020

Is arginine charged in a membrane?

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12 December 2020

Methodological and cellular aspects that govern the internalization mechanisms of arginine-rich cell-penetrating peptides

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12 December 2020

Molecular code for transmembrane-helix recognition by the Sec61 translocon

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12 December 2020

Molecular dynamics simulations suggest a mechanism for translocation of the HIV-1 TAT peptide across lipid membranes

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12 December 2020

Does arginine remain protonated in the lipid membrane? Insights from microscopic pKa calculations

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12 December 2020

Distribution of amino acids in a lipid bilayer from computer simulations.

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12 December 2020

A buried lysine that titrates with a normal pKa: Role of conformational flexibility at the protein-water interface as a determinant of pKavalues

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12 December 2020

Stimulated endocytosis in penetratin uptake: effect of arginine and lysine

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12 December 2020

Assessing atomistic and coarse-grained force fields for protein-lipid interactions: the formidable challenge of an ionizable side chain in a membrane.

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12 December 2020

Potential of mean force and pKa profile calculation for a lipid membrane-exposed arginine side chain

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12 December 2020

Titratable Amino Acid Solvation in Lipid Membranes as a Function of Protonation State

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12 December 2020

The molecular origin of like-charge arginine-arginine pairing in water

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12 December 2020

Roles of arginine and lysine residues in the translocation of a cell-penetrating peptide from (13)C, (31)P, and (19)F solid-state NMR.

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12 December 2020

CHARMM: the biomolecular simulation program

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12 December 2020

Cell penetrating peptides: how do they do it?

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12 December 2020

Electropositive charge in alpha-defensin bactericidal activity: functional effects of Lys-for-Arg substitutions vary with the peptide primary structure

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12 December 2020

Protein contents in biological membranes can explain abnormal solvation of charged and polar residues

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12 December 2020

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12 December 2020

Monte Carlo simulation studies of lipid order parameter profiles near integral membrane proteins

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12 December 2020

A Gating Charge Transfer Center in Voltage Sensors

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12 December 2020

Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types

1 reference

12 December 2020

Electrostatics of deformable lipid membranes

1 reference

12 December 2020

Chemical versus mechanical perturbations on the protonation state of arginine in complex lipid membranes: insights from microscopic pKa calculations

1 reference

12 December 2020

On the role of anionic lipids in charged protein interactions with membranes.

1 reference

12 December 2020

Impedimetric biosensor for early detection of cervical cancer

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12 December 2020

The role of membrane thickness in charged protein-lipid interactions.

1 reference

12 December 2020

Comparative study on the interaction of cell-penetrating polycationic polymers with lipid membranes

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12 December 2020

The role of tryptophan side chains in membrane protein anchoring and hydrophobic mismatch.

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12 December 2020

Buried lysine, but not arginine, titrates and alters transmembrane helix tilt.

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12 December 2020

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12 December 2020

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12 December 2020

The Role of Atomic Polarization in the Thermodynamics of Chloroform Partitioning to Lipid Bilayers.

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12 December 2020

Energy of an Ion crossing a Low Dielectric Membrane: Solutions to Four Relevant Electrostatic Problems

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12 December 2020

Affinities of amino acid side chains for solvent water

1 reference

12 December 2020

Differences in the interaction of heparin with arginine and lysine and the importance of these basic amino acids in the binding of heparin to acidic fibroblast growth factor

1 reference

12 December 2020

Elucidating the folding problem of helical peptides using empirical parameters. II. Helix macrodipole effects and rational modification of the helical content of natural peptides.

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12 December 2020

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1 reference

12 December 2020

Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp

1 reference

12 December 2020

Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides.

1 reference

12 December 2020

Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer

1 reference

12 December 2020

Experimentally determined hydrophobicity scale for proteins at membrane interfaces

1 reference

12 December 2020

A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems

1 reference

12 December 2020

Constant-pressure molecular dynamics investigation of cholesterol effects in a dipalmitoylphosphatidylcholine bilayer

1 reference

12 December 2020

Identifiers

DOI

10.1021/JP405418Y

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24007457%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

PubMed publication ID

24007457

1 reference