(Q43499927)

24 November 2017

title

Formation of complex extrachromosomal T-DNA structures in Agrobacterium tumefaciens-infected plants (English)

1 reference

Agrobacterium tumefaciens

24 November 2017

main subject

object named as

Agrobacterium tumefaciens

1 reference

Kamy Singer

1

1 reference

24 November 2017

Yoel M Shiboleth

series ordinal

2

1 reference

24 November 2017

Jianming Li

series ordinal

3

1 reference

24 November 2017

Tzvi Tzfira

series ordinal

4

1 reference

24 November 2017

language of work or name

English

0 references

publication date

13 July 2012

1 reference

24 November 2017

number of pages

12

1 reference

inferred from page(s)

published in

Plant Physiology

1 reference

24 November 2017

volume

160

1 reference

24 November 2017

issue

1

1 reference

24 November 2017

page(s)

511-522

1 reference

Creative Commons Attribution 4.0 International

24 November 2017

copyright license

start time

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Induction of telomere-mediated chromosomal truncation and stability of truncated chromosomes in Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Plant proteins involved in Agrobacterium-mediated genetic transformation

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

The T-DNA integration pattern in Arabidopsis transformants is highly determined by the transformed target cell.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

High frequency of single-copy T-DNA transformants produced by floral dip in CRE-expressing Arabidopsis plants.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

MMEJ repair of double-strand breaks (director's cut): deleted sequences and alternative endings

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Increasing cloning possibilities using artificial zinc finger nucleases

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Biological systems of the host cell involved in Agrobacterium infection

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Agrobacterium tumefaciens and plant cell interactions and activities required for interkingdom macromolecular transfer

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Integration of Agrobacterium tumefaciens transfer DNA (T-DNA) involves rearrangements of target plant DNA sequences

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Molecular analysis of transgene and vector backbone integration into the barley genome following Agrobacterium-mediated transformation.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Agrobacterium-mediated genetic transformation of plants: biology and biotechnology.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Involvement of KU80 in T-DNA integration in plant cells.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Recent advances in understanding of the DNA double-strand break repair machinery of plants.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

pSAT vectors: a modular series of plasmids for autofluorescent protein tagging and expression of multiple genes in plants.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Agrobacterium T-DNA integration: molecules and models.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

T-DNA integration in Arabidopsis chromosomes. Presence and origin of filler DNA sequences.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Targeted Integration of T-DNA into the Tobacco Genome at Double-Stranded Breaks: New Insights on the Mechanism of T-DNA Integration

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Transgene structures in T-DNA-inserted rice plants.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Ku80 plays a role in non-homologous recombination but is not required for T-DNA integration in Arabidopsis

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

A comprehensive characterization of single-copy T-DNA insertions in the Arabidopsis thaliana genome.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Ku80‐ and DNA ligase IV‐deficient plants are sensitive to ionizing radiation and defective in T‐DNA integration

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Agrobacterium-mediated plant transformation: the biology behind the "gene-jockeying" tool

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

T-DNA integration into the Arabidopsis genome depends on sequences of pre-insertion sites

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Analyses of single-copy Arabidopsis T-DNA-transformed lines show that the presence of vector backbone sequences, short inverted repeats and DNA methylation is not sufficient or necessary for the induction of transgene silencing

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

T-DNA integration into the barley genome from single and double cassette vectors

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Activity of the Agrobacterium T-DNA transfer machinery is affected by virB gene products

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Silencing on the spot. Induction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Determination of the T-DNA transfer and the T-DNA integration frequencies upon cocultivation of Arabidopsis thaliana root explants.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Capture of genomic and T-DNA sequences during double-strand break repair in somatic plant cells

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Role of the Agrobacterium tumefaciens VirD2 protein in T-DNA transfer and integration

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Investigation of Agrobacterium-mediated transformation of apple using green fluorescent protein: high transient expression and low stable transformation suggest that factors other than T-DNA transfer are rate-limiting

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Non-homologous DNA end joining in plant cells is associated with deletions and filler DNA insertions

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

T-DNA integration patterns in co-transformed plant cells suggest that T-DNA repeats originate from co-integration of separate T-DNAs.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Interactions between VirB9 and VirB10 membrane proteins involved in movement of DNA from Agrobacterium tumefaciens into plant cells

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Early transcription of Agrobacterium T-DNA genes in tobacco and maize

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

The Agrobacterium tumefaciens virulence D2 protein is responsible for precise integration of T-DNA into the plant genome

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Unusual plasmid DNA organization in an octopine crown gall tumor

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

VirD proteins of Agrobacterium tumefaciens are required for the formation of a covalent DNA--protein complex at the 5' terminus of T-strand molecules.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

vir-induced recombination in Agrobacterium. Physical characterization of precise and imprecise T-circle formation.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Extrachromosomal homologous recombination and gene targeting in plant cells after Agrobacterium mediated transformation

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Localized transient expression of GUS in leaf discs following cocultivation with Agrobacterium.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

T-DNA integration: a mode of illegitimate recombination in plants

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Illegitimate recombination in plants: a model for T-DNA integration.

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Molecular analysis of Agrobacterium T-DNA integration in tomato reveals a role for left border sequence homology in most integration events

29 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3440224

Site-Specific Nick in the T-DNA Border Sequence as a Result of Agrobacterium vir Gene Expression

1 December 2018

1 reference

12 December 2020

1 reference

12 December 2020

T-DNA recombination and replication in maize cells

1 reference

12 December 2020

Recovery of Agrobacterium tumefaciens T-DNA molecules from whole plants early after transfer

1 reference

12 December 2020

A comparison of transgenic barley lines produced by particle bombardment and Agrobacterium-mediated techniques

1 reference

12 December 2020

Genome-wide analysis of Agrobacterium T-DNA integration sites in the Arabidopsis genome generated under non-selective conditions

1 reference

12 December 2020

Transgene integration and organization in cotton (Gossypium hirsutum L.) genome

1 reference

12 December 2020

T-DNA–mediated transfer of Agrobacterium tumefaciens chromosomal DNA into plants

1 reference

12 December 2020

Transgene integration in aspen: structures of integration sites and mechanism of T-DNA integration

1 reference

12 December 2020

Site-specific integration of Agrobacterium tumefaciens T-DNA via double-stranded intermediates

1 reference

12 December 2020

Integration of T-DNA binary vector 'backbone' sequences into the tobacco genome: evidence for multiple complex patterns of integration

1 reference

12 December 2020

Complete sequence analysis of transgene loci from plants transformed via microprojectile bombardment

1 reference

12 December 2020

Details of T-DNA structural organization from a transgenic Petunia population exhibiting co-suppression

1 reference

12 December 2020

Frequent collinear long transfer of DNA inclusive of the whole binary vector during Agrobacterium-mediated transformation

1 reference

12 December 2020

Direct repeats of T-DNA integrated in tobacco chromosome: characterization of junction regions

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.112.200212

1 reference

24 November 2017

0 references

1 reference