(Q43860975)

English

Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth

scientific article published on 26 September 2012

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scholarly article

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Europe PubMed Central

PubMed publication ID

27 November 2017

Dynamic modeling of aerobic growth of Shewanella oneidensis. Predicting triauxic growth, flux distributions, and energy requirement for growth (English)

1 reference

Europe PubMed Central

PubMed publication ID

27 November 2017

Shewanella oneidensis

object named as

Shewanella oneidensis

1 reference

based on heuristic

inferred from title

Allan E Konopka

5

object named as

Allan E Konopka

1 reference

Europe PubMed Central

PubMed publication ID

27 November 2017

Jim K Fredrickson

6

object named as

James K Fredrickson

1 reference

Europe PubMed Central

PubMed publication ID

27 November 2017

4

object named as

Alexander S Beliaev

1 reference

Europe PubMed Central

PubMed publication ID

27 November 2017

author name string

Hyun-Seob Song

1

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Europe PubMed Central

PubMed publication ID

27 November 2017

Doraiswami Ramkrishna

2

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PubMed publication ID

27 November 2017

Grigoriy E Pinchuk

3

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Europe PubMed Central

PubMed publication ID

27 November 2017

publication date

26 September 2012

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PubMed publication ID

27 November 2017

Metabolic Engineering

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Europe PubMed Central

PubMed publication ID

27 November 2017

15

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Europe PubMed Central

PubMed publication ID

27 November 2017

25-33

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Europe PubMed Central

PubMed publication ID

27 November 2017

Mathematical modeling and analysis in biochemical engineering: past accomplishments and future opportunities

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Towards environmental systems biology of Shewanella

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Logistic equations effectively model Mammalian cell batch and fed-batch kinetics by logically constraining the fit.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

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Prediction of kinetic parameters from DNA-binding site sequences for modeling global transcription dynamics in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Ecology and biotechnology of the genus Shewanella

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Cybernetic model of the growth dynamics of Saccharomyces cerevisiae in batch and continuous cultures

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Exacting predictions by cybernetic model confirmed experimentally: steady state multiplicity in the chemostat

1 reference

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7 January 2021

A hybrid model of anaerobic E. coli GJT001: combination of elementary flux modes and cybernetic variables

1 reference

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7 January 2021

Investigation of bacterial growth on mixed substrates: experimental evaluation of cybernetic models

1 reference

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7 January 2021

Metal reduction kinetics in Shewanella

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

What is flux balance analysis?

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Cybernetic modeling of growth in mixed, substitutable substrate environments: Preferential and simultaneous utilization.

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7 January 2021

A glycyl radical solution: oxygen-dependent interconversion of pyruvate formate-lyase

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7 January 2021

Detection of elementary flux modes in biochemical networks: a promising tool for pathway analysis and metabolic engineering.

1 reference

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7 January 2021

ON ELEMENTARY FLUX MODES IN BIOCHEMICAL REACTION SYSTEMS AT STEADY STATE

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Genomic analysis of carbon source metabolism of Shewanella oneidensis MR-1: Predictions versus experiments

1 reference

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7 January 2021

Systematic development of hybrid cybernetic models: application to recombinant yeast co-consuming glucose and xylose.

1 reference

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7 January 2021

Reduction of a set of elementary modes using yield analysis

1 reference

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7 January 2021

Cybernetic models based on lumped elementary modes accurately predict strain-specific metabolic function

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Prediction of dynamic behavior of mutant strains from limited wild-type data

1 reference

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7 January 2021

Metabolic network structure determines key aspects of functionality and regulation

1 reference

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7 January 2021

A kinetic model describing Shewanella oneidensis MR-1 growth, substrate consumption, and product secretion.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Invariability of central metabolic flux distribution in Shewanella oneidensis MR-1 under environmental or genetic perturbations

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMBEN.2012.08.004

7 January 2021

Modeling chromate reduction in Shewanella oneidensis MR-1: development of a novel dual-enzyme kinetic model

1 reference

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7 January 2021

Metatool 5.0: fast and flexible elementary modes analysis

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A molecular transporter engineering approach to improving xylose catabolism in Saccharomyces cerevisiae

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7 January 2021

On the matching and proportional laws of cybernetic models.

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7 January 2021

Identifiers

10.1016/J.YMBEN.2012.08.004

1 reference

Europe PubMed Central

PubMed publication ID

27 November 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

27 November 2017

ResearchGate publication ID

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